PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G111400.1.p
Common NamePRUPE_ppa015761mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 450aa    MW: 50330.2 Da    PI: 4.363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G111400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.72.5e-2871382128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                         p+Gf+F+P+deel+ +yL +kv+g++++ e+vi+e+d+y ++ePwd  +     k+ ++ +++yfF+k ++++a+++r  r++ sg Wka 
  Prupe.3G111400.1.p   7 PMGFKFRPSDEELLGYYLLNKVRGSSFKYENVIPEFDLYgRIEPWDVWNqfggnKL-EDGDDLYFFTKLKSSSAKNTRMARTIGSGSWKAE 96 
                         89***************************99******99457*****742444222.245689**************************** PP

                 NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          + k+v +   k+++ g+ k L +   + ++ ++  W+mhey+l
  Prupe.3G111400.1.p  97 NSGKKVPDPkdKKNDLGMWKRLHYE--NPKSDQNGCWIMHEYSL 138
                         ******998667777*******997..45555799*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-314160IPR003441NAC domain
PROSITE profilePS5100531.4256161IPR003441NAC domain
PfamPF023651.0E-187138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MAPNNIPMGF KFRPSDEELL GYYLLNKVRG SSFKYENVIP EFDLYGRIEP WDVWNQFGGN  60
KLEDGDDLYF FTKLKSSSAK NTRMARTIGS GSWKAENSGK KVPDPKDKKN DLGMWKRLHY  120
ENPKSDQNGC WIMHEYSLRP SLVKPKPNST HRFVVCRIRK NHMRKRKFTS TAAKETHGIP  180
SLQSQNKKQR QQETSFDEYL IGNSTPMSQA IGGGPTETQS PQDCPFFAYP ITMVDDAIQF  240
HGDVLMGGFS PLVDSAQSFT EQADFGSYNQ ERTECIIEFD ETHATQQGLT DNNIGAAATE  300
ETDCQFGSEN SQPDNVDFSI DYGWLHHLIQ VDDDDVTTAT PSGSQSIHQS AVNDEERPAY  360
DPSSQSLTTE SALEFGMSSE NQTGAQLGVG TESAQVNASE FQVHNEDMLD FLNTATFDQL  420
VDLFQFPDDD DDDEVQAFTT ESSVMGIMG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-13516216166NO APICAL MERISTEM PROTEIN
1ut4_B7e-13516216166NO APICAL MERISTEM PROTEIN
1ut7_A7e-13516216166NO APICAL MERISTEM PROTEIN
1ut7_B7e-13516216166NO APICAL MERISTEM PROTEIN
3swm_A9e-13516219169NAC domain-containing protein 19
3swm_B9e-13516219169NAC domain-containing protein 19
3swm_C9e-13516219169NAC domain-containing protein 19
3swm_D9e-13516219169NAC domain-containing protein 19
3swp_A9e-13516219169NAC domain-containing protein 19
3swp_B9e-13516219169NAC domain-containing protein 19
3swp_C9e-13516219169NAC domain-containing protein 19
3swp_D9e-13516219169NAC domain-containing protein 19
4dul_A7e-13516216166NAC domain-containing protein 19
4dul_B7e-13516216166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G111400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020416722.10.0uncharacterized protein LOC18783289
TrEMBLA0A251PYI60.0A0A251PYI6_PRUPE; Uncharacterized protein
STRINGEMJ173740.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.12e-18NAC domain containing protein 28