PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G118000.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 327aa    MW: 37019.9 Da    PI: 10.536
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G118000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.41.2e-1529121186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                         +W+++ + +Liea  e++ +l+rg+l++++Weev++++            +r+ +qCk++ + l+k+yk +k++ ++ + + +s +p+f+ 
  Prupe.3G118000.1.p  29 CWSEDATFTLIEAWGERHLSLNRGNLRQKHWEEVADAVnachvtaDNPRSRRTDVQCKNRVDTLKKKYKIEKARVSDSNGDYTSPWPFFSL 119
                         7******************************************976667789************************99999999*****98 PP

            trihelix  85 le 86 
                         l+
  Prupe.3G118000.1.p 120 LD 121
                         86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.1E-2427123No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDFVAGSPSP VTAPRPNSKT ASVPVREDCW SEDATFTLIE AWGERHLSLN RGNLRQKHWE  60
EVADAVNACH VTADNPRSRR TDVQCKNRVD TLKKKYKIEK ARVSDSNGDY TSPWPFFSLL  120
DSLIGSKFPK PSPPLPRRST PSPPLPRRRP PSPPLQWTFP VARRSATVKR PAAAFFPAPG  180
DEPVLNQNLD FSAFAAVAAA AAAESEESER SPSRSSVGGS RMRDRDREVG CVELAMAIER  240
FAEIYERVEQ RKQRQMVELE KQRMQFAKDL EYHRMQLFME TTKHQLRKIK RAKRSSSSPG  300
NNGIKGKRLS FTFMVEKFNK ENTENF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.63151e-154fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G118000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF2139381e-121AF213938.1 Prunus dulcis proline-rich protein (PRP) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414343.10.0trihelix transcription factor ASIL2 isoform X1
TrEMBLA0A251PZ270.0A0A251PZ27_PRUPE; Uncharacterized protein
STRINGEMJ169400.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.19e-70sequence-specific DNA binding transcription factors