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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.3G162500.1.p |
| Common Name | PRUPE_ppa003206mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
GRAS |
| Protein Properties |
Length: 594aa MW: 64551.4 Da PI: 4.9055 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G162500.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 454.2 | 8e-139 | 224 | 584 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
lv++L++cAeav++++l+ a+al++++s la++++ +m+++a+yf+eALa+r++r + p+++ +++ s+ l++ f+e++P+l
Prupe.3G162500.1.p 224 LVHTLVACAEAVQQENLKIADALVKHVSLLAASQAGAMRKVATYFAEALARRIYR--------IYPQDSLDSSYSDILQM--HFYETCPYL 304
689****************************************************........44555554445555444..5******** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
kf+h+taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpps+R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +v
Prupe.3G162500.1.p 305 KFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFV 395
******************************************************************************************* PP
GRAS 183 akrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
a++l+dle+++L+++p E++aVn+ ++lh ll++++++e+ vL+ +k ++Pk+v++veqea+hn++ Fl+rf eal+yys lfdsl
Prupe.3G162500.1.p 396 ANSLADLEPSMLEIRPpdVETVAVNSCFELHPLLARPGAVEK----VLSSIKAMKPKIVTIVEQEANHNGPIFLDRFNEALHYYSNLFDSL 482
****************999***********************....********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
e + + +++ ++++++lgr+i+nvvaceg++r+erhetl++Wr r+++aGF v+l+++a kqa++ll+ ++ +dgyrvee++gsl+lg
Prupe.3G162500.1.p 483 EGS--SGPSQDLVMSEVYLGRQICNVVACEGQDRVERHETLSQWRGRMDSAGFDLVHLGSNAFKQASMLLALFAgGDGYRVEENNGSLMLG 571
999..566999******************************************************************************** PP
GRAS 362 WkdrpLvsvSaWr 374
W++rpL+++SaW+
Prupe.3G162500.1.p 572 WHTRPLIATSAWQ 584
************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 594 aa
Download sequence Send
to blast |
MKRDHRGTCT DQNGSKGEYS SSSSSVLNGK AKIWEQDQDG CGGSGGMDEL LAVLGYKVRA 60
SDMAEVAEKL EQLEMVMGSA QEDGISQLSD TVHYNPSDLS GWVQSMLSEF NTVDGSAIDD 120
PLFVAADSSS ITSIHFSNSH RIENPASRVF HDDSEYDLRA IPGVAAYPQT HLDSEAESRR 180
KRLKTSIGSN SIGPNSGVGA DSGSVSDPAR PLVLVDSQET GVRLVHTLVA CAEAVQQENL 240
KIADALVKHV SLLAASQAGA MRKVATYFAE ALARRIYRIY PQDSLDSSYS DILQMHFYET 300
CPYLKFAHFT ANQAILEAFA TASRVHVIDF GLKQGMQWPA LMQALALRPG GPPSFRLTGI 360
GPPQPDNTDA LQQVGWKLAQ LAETIGVEFE FRGFVANSLA DLEPSMLEIR PPDVETVAVN 420
SCFELHPLLA RPGAVEKVLS SIKAMKPKIV TIVEQEANHN GPIFLDRFNE ALHYYSNLFD 480
SLEGSSGPSQ DLVMSEVYLG RQICNVVACE GQDRVERHET LSQWRGRMDS AGFDLVHLGS 540
NAFKQASMLL ALFAGGDGYR VEENNGSLML GWHTRPLIAT SAWQLASSTE STR*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
