PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G248500.1.p
Common NamePRUPE_ppa023507mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 247aa    MW: 27941.7 Da    PI: 5.597
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G248500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.31.1e-25192241251
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                          rl Wt+eLH++Fve+++ LGG+ +AtPk+i+e+m+v+gLt+++vkSHLQ
  Prupe.3G248500.1.p 192 SRLSWTQELHTKFVEVLSMLGGPAEATPKQIREAMQVEGLTNDQVKSHLQ 241
                         69************************************************ PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.571188246IPR017930Myb domain
SuperFamilySSF466891.15E-12189242IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.8E-21190241IPR009057Homeodomain-like
TIGRFAMsTIGR015575.9E-22192244IPR006447Myb domain, plants
PfamPF002492.2E-6193241IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MGSTSNPLEL NSLDLALSLK PSYVPKSLNH LFSDLASIDN VPHKLSVLNE YLLKHQEELH  60
RVEEFKRDLP QCVLLLLDAI QTLNNEIEKL SGQDQFDACK NRGSCEDPVE RRSAFRKYKS  120
SSPPFNPRPR NQDHTSQDHK VKGKEPILME PSPRRPFPCD LNMEASGSEL ELEPEPDPQP  180
QPEVPPPMWK HSRLSWTQEL HTKFVEVLSM LGGPAEATPK QIREAMQVEG LTNDQVKSHL  240
QVGFEL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G248500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007217527.21e-177uncharacterized protein LOC18783336
TrEMBLA0A251Q5481e-180A0A251Q548_PRUPE; Uncharacterized protein
STRINGEMJ187261e-176(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.13e-17G2-like family protein