PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G257500.1.p
Common NamePRUPE_ppa016813mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 539aa    MW: 60441.1 Da    PI: 7.7379
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G257500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00056325123
                        EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                        ++C+ C+k+Fs+   L  H+r H
  Prupe.3G257500.1.p  3 HRCKLCNKTFSSGKVLGGHMRGH 25
                        79******************988 PP
2zf-C2H211.30.00180100323
                         ETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                         C+ Cgk+F +   +  H+r H
  Prupe.3G257500.1.p  80 CKVCGKRFDSMKAMFGHMRHH 100
                         *******************99 PP
3zf-C2H216.42.5e-05111131323
                         ETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                         C+dCgk F +   L+ H + H
  Prupe.3G257500.1.p 111 CKDCGKAFESLRALTAHTKIH 131
                         99****************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.1E-8325IPR007087Zinc finger, C2H2
SuperFamilySSF576676.84E-9325No hitNo description
PROSITE profilePS5015710.055330IPR007087Zinc finger, C2H2
SMARTSM003550.036325IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280525IPR007087Zinc finger, C2H2
SuperFamilySSF576676.84E-973100No hitNo description
PROSITE profilePS501579.9378105IPR007087Zinc finger, C2H2
SMARTSM003550.4478100IPR015880Zinc finger, C2H2-like
PfamPF139121.7E-680102IPR007087Zinc finger, C2H2
PROSITE patternPS00028080100IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.429109136IPR007087Zinc finger, C2H2
SMARTSM003550.12109131IPR015880Zinc finger, C2H2-like
SuperFamilySSF576678.47E-9110131No hitNo description
PfamPF139129.4E-4110133IPR007087Zinc finger, C2H2
PROSITE patternPS000280110131IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.2E-4111132IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576678.47E-9367394No hitNo description
PfamPF139122.4E-5372395IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.616372399IPR007087Zinc finger, C2H2
SMARTSM003550.52372394IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280374394IPR007087Zinc finger, C2H2
SuperFamilySSF576671.3E-5450479No hitNo description
PfamPF139122.5E-10452475IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.99453480IPR007087Zinc finger, C2H2
SMARTSM003550.16453475IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280455475IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MEHRCKLCNK TFSSGKVLGG HMRGHGTKNS AKAEKKLKVS NVDFEGDDDE HAGYGLRVNP  60
KKSWKFSGSK VQASEKESLC KVCGKRFDSM KAMFGHMRHH SSRERKETQC CKDCGKAFES  120
LRALTAHTKI HSKRLRTSDG SQSISSEKLF VDFQYSTETM GLIRRKRSKR LRYKITPSSS  180
FSGMNESEFG QEVVDGAICL MIISRGGSNW GRISSVTESS DNNSLSLEVQ SPVQKNRIMG  240
NRGGISVCND TGNKIFEFGE NDSGFASDEE KTGKLEVPID RFYRGAECKR PKLDEDSAFV  300
GYDAEIEKES HGEMEAILTE VELDVDIIEE EELDVTKLGS MKSGMKACDS SNNMLYGTES  360
EIFADSRKKR EHKCRTCKKL FRSHQALGGH QRVHKATNNC SGEKIEDSED KIQINKLSKI  420
EYSCKLAKLE CTDNSEEQEM ERATVTGFES KVHRCSICLK VFATGQALGG HKRVHFGKDS  480
ETGTEQTRAL KQQISEICDV FELSQPVKLE EENGDVEFKS WWLGNEHKRE LLVGLMPN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G257500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216232.10.0zinc finger protein 197
TrEMBLM5WW110.0M5WW11_PRUPE; Uncharacterized protein
STRINGEMJ174310.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133592027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.16e-18C2H2-like zinc finger protein