PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G040900.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 350aa    MW: 38721.1 Da    PI: 10.2561
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G040900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.31.2e-304211952128
                 NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ ++++vg+kk Lvfy g+ pkg k++W+mheyrl
  Prupe.4G040900.2.p  42 TFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSiGNQKVGVKKALVFYGGKPPKGIKSNWIMHEYRL 119
                         44789*************************************9989999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100538.3931152IPR003441NAC domain
SuperFamilySSF1019415.23E-3840152IPR003441NAC domain
PfamPF023653.3E-1545119IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MKSWWSIISR KRPPPLLYRS PSSPRWTCTS LIHGSYQVRK ATFGEQEWYF FSPRDRKYPN  60
GARPNRAATS GYWKATGTDK PILTSIGNQK VGVKKALVFY GGKPPKGIKS NWIMHEYRLV  120
NNNNNFSKPP DASNKKASLR LDDWVLCRIY KKNNAQRPMM DEDSSNNSMD GMFAHPSSIL  180
PAPPPPPPQP KHTTNYTALL ENDDHEGFFE GILSSNDQQG SHSHHHHQHH QHHQHHHDQF  240
GGISTSSSKS NLPVKRPLSS SFWNDAGSMG TAAAAATTSS SSKRFHADLN SGISATAAGG  300
VDESNSSFVS MLNQLPQGTA PFHSNALLGS LGDGVLRQQF QHPSMNWNS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-474015565168NO APICAL MERISTEM PROTEIN
1ut4_B4e-474015565168NO APICAL MERISTEM PROTEIN
1ut7_A4e-474015565168NO APICAL MERISTEM PROTEIN
1ut7_B4e-474015565168NO APICAL MERISTEM PROTEIN
4dul_A4e-474015565168NAC domain-containing protein 19
4dul_B4e-474015565168NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G040900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8227090.0KR822709.1 Prunus persica NAC transcription factor NAC2 (NAC2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211453.10.0NAC transcription factor 25
TrEMBLA0A251PFK60.0A0A251PFK6_PRUPE; Uncharacterized protein
STRINGEMJ126520.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.15e-68NAC domain containing protein 2