PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.4G081800.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 394aa MW: 43259.8 Da PI: 7.1241

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.4G081800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00074	19	40	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k+F+++ L H++ H Prupe.4G081800.1.p 19 QCLYCKKVFKNHQALGGHLSAH 40 7**************9999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.559	18	45	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	20	40	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence Send to blast
MNFLLTPDKG KEEKHVGVQC LYCKKVFKNH QALGGHLSAH QEEINSKRSW NYPSHFSNSV 60 SITNNSPQPF SMRHPEIFSG GPLFSEVTPP LDFSKRLYSN ENSWVNISRF YENNTSAMPP 120 KCSSSSGHAE IQNSKPLSFI APAPSVSMVP ISVPLDPPFC LVSNGVCQFN TDQFRSFRDG 180 MPSFSANAMP CFQDHNCVMI PYPVNAVTDL HPDLSSKQSL CFKEPITIGS LPPDPSESSG 240 QGEIGRYKTQ TVSTSKGRKK HCIGGAGGSA DEIMNPSKKP KKNSELLMET DKPPHPSQSS 300 DQGEIGQYET QILLTSKGGK RHCLGEAGGS AEMMNCQWKR PKINSELSME TDKPPKRELL 360 LFKDVENCFS RAGISSNAGE EEGQMDLDLS LHL*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence Send to blast

MNFLLTPDKG KEEKHVGVQC LYCKKVFKNH QALGGHLSAH QEEINSKRSW NYPSHFSNSV  60
SITNNSPQPF SMRHPEIFSG GPLFSEVTPP LDFSKRLYSN ENSWVNISRF YENNTSAMPP  120
KCSSSSGHAE IQNSKPLSFI APAPSVSMVP ISVPLDPPFC LVSNGVCQFN TDQFRSFRDG  180
MPSFSANAMP CFQDHNCVMI PYPVNAVTDL HPDLSSKQSL CFKEPITIGS LPPDPSESSG  240
QGEIGRYKTQ TVSTSKGRKK HCIGGAGGSA DEIMNPSKKP KKNSELLMET DKPPHPSQSS  300
DQGEIGQYET QILLTSKGGK RHCLGEAGGS AEMMNCQWKR PKINSELSME TDKPPKRELL  360
LFKDVENCFS RAGISSNAGE EEGQMDLDLS LHL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.4G081800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020418439.1	0.0	uncharacterized protein LOC109948932
Refseq	XP_020418440.1	0.0	uncharacterized protein LOC109948932
TrEMBL	A0A251PHF1	0.0	A0A251PHF1_PRUPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17103	3	3

Link Out ? help Back to Top
Phytozome	Prupe.4G081800.1.p