PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.4G151900.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 255aa MW: 29516.9 Da PI: 4.9011

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.4G151900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.2	1.9e-24	7	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sg 81 +p+G++F+P++eel +yL ++++g++ ++ +++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g Prupe.4G151900.1.p 7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPI-GIVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGTRFCRTVGaagTG 94 599*************************.89***98797423322..24355688**************64334499 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wk + k++ + g+++g++k + + + +p+ +W+mhe++l Prupe.4G151900.1.p 95 VWKGEDSGKKIRA-CGSDIGIRKRFRYMNPGSPH--DDRWIMHEFQL 138 9*******9.999*******655555..89*****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.62E-30	4	159	IPR003441	NAC domain
PROSITE profile	PS51005	29.859	7	159	IPR003441	NAC domain
Pfam	PF02365	7.1E-16	8	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPIGIVP DCDLYGTKEP WEIWRDFHHS 60 SPDDQEDIYV FTTLKKKTPN GTRFCRTVGA AGTGVWKGED SGKKIRACGS DIGIRKRFRY 120 MNPGSPHDDR WIMHEFQLDE SLLRVRNKET IVLCLVRKKE TSGKRKLEEL QDHEDVPPRG 180 EIQAQHVHDD QQHHIGPSTY DQLRVLDLTN DVEGEDDMVN PTLLAQYDQQ EHLGTSTDDQ 240 LIRFLEDYLD VEQN*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	5e-18	6	165	16	171	NO APICAL MERISTEM PROTEIN
1ut4_B	5e-18	6	165	16	171	NO APICAL MERISTEM PROTEIN
1ut7_A	5e-18	6	165	16	171	NO APICAL MERISTEM PROTEIN
1ut7_B	5e-18	6	165	16	171	NO APICAL MERISTEM PROTEIN
3swm_A	6e-18	6	165	19	174	NAC domain-containing protein 19
3swm_B	6e-18	6	165	19	174	NAC domain-containing protein 19
3swm_C	6e-18	6	165	19	174	NAC domain-containing protein 19
3swm_D	6e-18	6	165	19	174	NAC domain-containing protein 19
3swp_A	6e-18	6	165	19	174	NAC domain-containing protein 19
3swp_B	6e-18	6	165	19	174	NAC domain-containing protein 19
3swp_C	6e-18	6	165	19	174	NAC domain-containing protein 19
3swp_D	6e-18	6	165	19	174	NAC domain-containing protein 19
4dul_A	5e-18	6	165	16	171	NAC domain-containing protein 19
4dul_B	5e-18	6	165	16	171	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.4G151900.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT893414	1e-161	KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008226305.2	1e-160	PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 66-like
TrEMBL	A0A251PKX6	0.0	A0A251PKX6_PRUPE; Uncharacterized protein
STRING	XP_008226305.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF557	24	133

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61910.1	1e-22	NAC domain protein 66

Link Out ? help Back to Top
Phytozome	Prupe.4G151900.1.p