PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G154000.1.p
Common NamePRUPE_ppa020506mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 295aa    MW: 33821.6 Da    PI: 4.3517
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G154000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.71.1e-2361371128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknra...tksg 81 
                         +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r+   t +g
  Prupe.4G154000.1.p   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTvgvTGTG 93 
                         599************************999.99*******9879****7423322..24355688******************645588** PP

                 NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +Wk   + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Prupe.4G154000.1.p  94 VWKGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                         ************9.999***********655555..89*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-293158IPR003441NAC domain
PROSITE profilePS5100529.1396158IPR003441NAC domain
PfamPF023654.9E-157137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGVT GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SGKSKLEERQ NHEVDLPSSG  180
EIQAQYVHDD QQQHIDASTE DQLFLEDYLM NDVEGEHDTM VNPSLLAQYD QQDMIGTSTE  240
DQLRVLEDFL MNDVEGEQDT MVNPALLAQY GQQGTSIEDQ LRLFEDYLMS DIEG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-17616317170NO APICAL MERISTEM PROTEIN
1ut4_B8e-17616317170NO APICAL MERISTEM PROTEIN
1ut7_A8e-17616317170NO APICAL MERISTEM PROTEIN
1ut7_B8e-17616317170NO APICAL MERISTEM PROTEIN
3swm_A8e-17616320173NAC domain-containing protein 19
3swm_B8e-17616320173NAC domain-containing protein 19
3swm_C8e-17616320173NAC domain-containing protein 19
3swm_D8e-17616320173NAC domain-containing protein 19
3swp_A8e-17616320173NAC domain-containing protein 19
3swp_B8e-17616320173NAC domain-containing protein 19
3swp_C8e-17616320173NAC domain-containing protein 19
3swp_D8e-17616320173NAC domain-containing protein 19
4dul_A8e-17616317170NAC domain-containing protein 19
4dul_B8e-17616317170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G154000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934140.0KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020417161.11e-144NAC domain-containing protein 66
TrEMBLM5WY380.0M5WY38_PRUPE; Uncharacterized protein
STRINGEMJ142630.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.12e-20NAC domain protein 66