PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.4G192500.1.p

Common Name

PRUPE_ppa017436mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NZZ/SPL

Protein Properties

Length: 358aa MW: 38348.9 Da PI: 9.0713

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.4G192500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	20.7	6.9e-07	1	75	1	82
NOZZLE 1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklv 82 mat +++m+++q + ++p + l e + e tk ++g k k+++ +k+p rg+gva+ler ++++ kk++ Prupe.4G192500.1.p 1 MATPMLLMASEQSTTQEPTKTLV------GFYEESKPEsTKSTKGTKKSGKASN-SKKQP-QRGLGVAQLERLRLQDRWKKMT 75 8999999***99999987654......4456777784566678887777654.34455.7**************99995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	1.1E-7	19	219	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence Send to blast
MATPMLLMAS EQSTTQEPTK TLVGFYEESK PESTKSTKGT KKSGKASNSK KQPQRGLGVA 60 QLERLRLQDR WKKMTELPQL QPQPQVVNLP DHHQYQNFQH QNPTRTLPGP LASVPVQYGA 120 SSYNGPLLIK GSGGNGLFGF VGQRFGNGSG FGYAGGNNLV VDLNPSPYAI GAPERFEVGA 180 VYETSKELSS IPKVQPLSSD CCDICCKKQK KRLNSRNYMG LNGRSGKSEA SLPINCSGFL 240 RLNPEAGGGQ VVGRSTAHSG YRNDDQGVEV RAVHRKGSSA GGGIFMEYDF FPAAGGKSSE 300 MRGGTCPKEP EMWQTAEASV SVGSHEEPSD ITASSYGYGI GADSYHNPVD LSLKLSF*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence Send to blast

MATPMLLMAS EQSTTQEPTK TLVGFYEESK PESTKSTKGT KKSGKASNSK KQPQRGLGVA  60
QLERLRLQDR WKKMTELPQL QPQPQVVNLP DHHQYQNFQH QNPTRTLPGP LASVPVQYGA  120
SSYNGPLLIK GSGGNGLFGF VGQRFGNGSG FGYAGGNNLV VDLNPSPYAI GAPERFEVGA  180
VYETSKELSS IPKVQPLSSD CCDICCKKQK KRLNSRNYMG LNGRSGKSEA SLPINCSGFL  240
RLNPEAGGGQ VVGRSTAHSG YRNDDQGVEV RAVHRKGSSA GGGIFMEYDF FPAAGGKSSE  300
MRGGTCPKEP EMWQTAEASV SVGSHEEPSD ITASSYGYGI GADSYHNPVD LSLKLSF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.4G192500.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007212466.1	0.0	uncharacterized protein LOC18781353
TrEMBL	M5X3J1	0.0	M5X3J1_PRUPE; Uncharacterized protein
STRING	EMJ13665	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8365	17	23

Link Out ? help Back to Top
Phytozome	Prupe.4G192500.1.p
Entrez Gene	18781353