PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G246100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 406aa    MW: 45283 Da    PI: 4.4792
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G246100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.34.3e-25101421128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                         lp+Gf+F+P+d++l+ +yL +kv+g+++  e+vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r+ r++ sg+Wk  
  Prupe.4G246100.1.p  10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGE 100
                         79*************************99999******99568*****742444222366799**************************99 PP

                 NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          + ++v +   k+++ g+ k + +   + ++ +   W+mhey+l
  Prupe.4G246100.1.p 101 NSGTTVSDPenKENDLGTWKRFHYE--NPKSVQDGCWIMHEYSL 142
                         9999999985556668888887776..66667799*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-307164IPR003441NAC domain
PROSITE profilePS5100529.44510165IPR003441NAC domain
PfamPF023657.0E-1711142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGTWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDISFAYPT  240
TVVSSQARAN NTDDVSQFHA GGDGDALMSD FLLSDTAQPF TEQALGSYAV CNQERASDVY  300
ETQQGLVLTD NNIGYWPSPF GSEEDQVNAL DFSMDYDLLD HLIDCDDDND GLRQSSTAQF  360
MGMGMENTTT ANQKPCWSSG NKSCFISGGF ILLWSYQKPG PITQE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-1341429140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RGKRKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G246100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934130.0KT893413.1 Prunus persica cultivar Jinliuzaohong NAC68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007213177.20.0NAC domain-containing protein 74
TrEMBLA0A251PTM40.0A0A251PTM4_PRUPE; Uncharacterized protein
STRINGEMJ143760.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.11e-18NAC domain containing protein 86