PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.5G011200.6.p

Common Name

PRUPE_ppa001086mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 646aa MW: 72170.5 Da PI: 5.8364

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.5G011200.6.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	21.6	4.2e-07	592	617	1	26
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26 aek i+le+l+kyFs+++kdAA+++g Prupe.5G011200.6.p 592 AEKAITLEVLRKYFSGSLKDAANSIG 617 5899********************98 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence Send to blast
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SSAHINPSVF 60 WHMLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI 120 KSYELNRRWW IGPLGNQGPA SSVMERLTRA LVCIREVMRD KNVLVQVWVP VNKGGRNVLT 180 TNDDLFSLDS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR 240 SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV 300 DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRCACETHKL PLAQTWVSCI QQGKDGCRHS 360 DDNYVHCVST VDHAFHVTDP YIEGFYEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV 420 KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSLII 480 QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVHLSGNDV SIFPMENPRE 540 VLGVKSSKLR QHQPDSNLKV GVKCGRECSA LGEGSFSSVG VSKTREKRRT KAEKAITLEV 600 LRKYFSGSLK DAANSIGGYA DNTGLNVGHL EKLRRLVTLY RNSNL*

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence Send to blast

MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SSAHINPSVF  60
WHMLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLGNQGPA SSVMERLTRA LVCIREVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLDS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV  300
DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRCACETHKL PLAQTWVSCI QQGKDGCRHS  360
DDNYVHCVST VDHAFHVTDP YIEGFYEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV  420
KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSLII  480
QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVHLSGNDV SIFPMENPRE  540
VLGVKSSKLR QHQPDSNLKV GVKCGRECSA LGEGSFSSVG VSKTREKRRT KAEKAITLEV  600
LRKYFSGSLK DAANSIGGYA DNTGLNVGHL EKLRRLVTLY RNSNL*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.5G011200.6.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007210497.1	0.0	protein NLP5 isoform X2
Swissprot	Q9SFW8	0.0	NLP5_ARATH; Protein NLP5
TrEMBL	A0A251P1M8	0.0	A0A251P1M8_PRUPE; Uncharacterized protein
STRING	EMJ11696	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Prupe.5G011200.6.p
Entrez Gene	18777244