PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G038200.1.p
Common NamePRUPE_ppa014855mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 239aa    MW: 25893.7 Da    PI: 5.5155
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G038200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127294123
                        EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                        y+C+ C + F++   L  H+++H
  Prupe.5G038200.1.p 72 YTCTFCRREFRSAQALGGHMNVH 94
                        9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.59E-66999No hitNo description
SMARTSM003550.00667294IPR015880Zinc finger, C2H2-like
PfamPF139121.8E-57295IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.1577299IPR007087Zinc finger, C2H2
PROSITE patternPS0002807494IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MAELGLLSLT ELQKLSLSQQ NQSQLLNPSL PPKAWMWNPK PAQEPEDDSW EVRAFAEDTG  60
NVMGTTWPPR SYTCTFCRRE FRSAQALGGH MNVHRRDRAR LHQSHPPINP ASASSASTSS  120
FIIPTQEFVN ANGGLCLVYQ LPSPSSINGA SFNTATTLMS SSSHGVEQSP STLLSISPNI  180
PPHDYLASVV PPGTNSQYCH SSKSADDPEP STPETENGNF EELDLELRLG HGRPTVPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A2e-136794229superman protein
2l1o_A2e-136794229Transcriptional regulator SUPERMAN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G038200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210250.11e-175zinc finger protein 10
TrEMBLM5WCI01e-174M5WCI0_PRUPE; Uncharacterized protein
STRINGEMJ114491e-175(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35253155
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.13e-41C2H2 family protein