PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.5G050200.1.p

Common Name

PRUPE_ppa006936mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 390aa MW: 43122.5 Da PI: 8.0134

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.5G050200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	27.4	1e-08	56	90	5	39
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39 + +C++CGn a+ C +e C+ CC C+ hv Prupe.5G050200.1.p 56 KPKCKQCGNVARSRCPYESCKSCCSKAQNPCHIHV 90 569*******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence Send to blast
MAATAPSPSP ALSSTSSGAT PSTAATTATA AVPAVAPFQT VHRTDTPPKT LRGLNKPKCK 60 QCGNVARSRC PYESCKSCCS KAQNPCHIHV LKSNATFPDK APTSSSPLFD HQSIEASPSG 120 NSHRVASLRQ LSNNFAQFNN VHLPLRSRKP LTKKDAVAIN EWRFSKLKEY KDRNIEVENE 180 AFDRYTQNVT LLEEVFSVKS IMEESIGDEA ELKSISTDNS TTATTEEDTE AMVSGLKLKL 240 RSNPMRTNNF RKRIQQVVDE GLKKLKKREL DDGEKEPIVG TGLDPGPKEG EKWQAERASA 300 LGDLIDKLNK ARNEEDLKLC LEMKSQLFKE HKLTSTSESE EKQATKNDLE PRKESNYSFP 360 KVVSTTEIDQ ETLNIVYTHF SSLEHIQGL*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence Send to blast

MAATAPSPSP ALSSTSSGAT PSTAATTATA AVPAVAPFQT VHRTDTPPKT LRGLNKPKCK  60
QCGNVARSRC PYESCKSCCS KAQNPCHIHV LKSNATFPDK APTSSSPLFD HQSIEASPSG  120
NSHRVASLRQ LSNNFAQFNN VHLPLRSRKP LTKKDAVAIN EWRFSKLKEY KDRNIEVENE  180
AFDRYTQNVT LLEEVFSVKS IMEESIGDEA ELKSISTDNS TTATTEEDTE AMVSGLKLKL  240
RSNPMRTNNF RKRIQQVVDE GLKKLKKREL DDGEKEPIVG TGLDPGPKEG EKWQAERASA  300
LGDLIDKLNK ARNEEDLKLC LEMKSQLFKE HKLTSTSESE EKQATKNDLE PRKESNYSFP  360
KVVSTTEIDQ ETLNIVYTHF SSLEHIQGL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.5G050200.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007209228.1	0.0	uncharacterized protein LOC18777712 isoform X1
TrEMBL	M5W9K1	0.0	M5W9K1_PRUPE; Uncharacterized protein
STRING	EMJ10427	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7690	16	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	1e-101

Link Out ? help Back to Top
Phytozome	Prupe.5G050200.1.p
Entrez Gene	18777712