PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G079100.3.p
Common NamePRUPE_ppa007572mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 278aa    MW: 31758 Da    PI: 7.5026
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G079100.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-053556223
                        EETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                        +C  Cg++F +++ L +H + H
  Prupe.5G079100.3.p 35 VCRVCGRRFYTNEKLLNHFKIH 56
                        6*****************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.88E-53460No hitNo description
PROSITE profilePS5015710.8243461IPR007087Zinc finger, C2H2
PROSITE patternPS0002803656IPR007087Zinc finger, C2H2
CDDcd061673.03E-999186No hitNo description
PfamPF019361.6E-6103188IPR021139NYN domain, limkain-b1-type
Gene3DG3DSA:3.40.50.10108.1E-5124185IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005739Cellular Componentmitochondrion
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MIAYANRHAL NYVPQVVRER KERNRVVIRD GELNVCRVCG RRFYTNEKLL NHFKIHEREH  60
AKRLNQIESA RGSRRVKLVG KYSMKMEKYK NGARDVLTPK AGRGLADEVK RAGFWVRSVM  120
DNPQRVDAAL RNHIVDMMDH KRAECLMLVS DDSDFVDVVM EAKLRCLKTV VVGDFGDGAL  180
KRAADSGFSW NEILIGKAKK EAVSVVGKWK DRDVLKRLEW TYKPDEEQSV NSWDDEVDGE  240
SEDEEIEGIV DGVNDNLGKD VSGRWWELDS DADSSKC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G079100.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209278.10.0uncharacterized protein LOC18776041
TrEMBLM5W9Q40.0M5W9Q4_PRUPE; Uncharacterized protein
STRINGEMJ104770.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.14e-86C2H2 family protein