PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.5G086600.1.p

Common Name

PRUPE_ppa025455mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 173aa MW: 19741.1 Da PI: 9.4728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.5G086600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.6e-12	90	137	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ + ++ Lr+ lP ++K s ++ + ++v+YIk+Lq Prupe.5G086600.1.p 90 RDIERQRRQEMATLYASLRSQLPLeY---LKGKRSISDHVHETVNYIKHLQ 137 679*******************77...9******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.75E-13	81	155	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.89E-8	82	141	No hit	No description
PROSITE profile	PS50888	12.481	84	136	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.2E-9	90	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.7E-4	90	142	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.5E-9	91	154	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence Send to blast
MDYIPSNTLQ FDQALQQADE LFQISCLPYT EHTTQENQAL PPTPSQDGRD LTCRPKSGQK 60 RRASISSSSI TFGEIEDEQN PKGNKKIMPR DIERQRRQEM ATLYASLRSQ LPLEYLKGKR 120 SISDHVHETV NYIKHLQSNI QELHNKRDGL KRSCDTSCSS STSTTTKSKR RR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.5G086600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007208837.2	1e-118	transcription factor bHLH126
TrEMBL	A0A251P5K2	1e-124	A0A251P5K2_PRUPE; Uncharacterized protein
STRING	EMJ10036	1e-124	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	1e-24	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.5G086600.1.p
Entrez Gene	18776651