PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G131600.2.p
Common NamePRUPE_ppa019752mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRF
Protein Properties Length: 518aa    MW: 56777.3 Da    PI: 7.8608
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G131600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC75.36.4e-24199243145
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                         d+ep+rC+RtDGKkWRCsr+v +++k+CErH h++r rsrk++e+
  Prupe.5G131600.2.p 199 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSRPRSRKPVES 243
                         79****************************************986 PP
2QLQ51.92.3e-18138171235
                 QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 
                         +FT+aQ ++L++Q ++y+yL++++PvPp+Ll++i
  Prupe.5G131600.2.p 138 PFTPAQREELERQTMIYRYLMSSAPVPPHLLVPI 171
                         8********************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.1E-10137173IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.8E-13138171IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.888138173IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166726.077199243IPR014977WRC domain
PfamPF088791.1E-19200242IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MGKRNGFVVA SEKGTAEETT ECCDIGLGLM MQKTHQSFPR KKMMMMMPHH HDHHEQTLLS  60
SGGSFGGEGC GVFEHSASGP LFCNTSNPVT SCISDIYNAV GSDFGSLVPK SLQQPYSDHS  120
LSFSPSVGGM VNVNVRLPFT PAQREELERQ TMIYRYLMSS APVPPHLLVP IAKNPSNVAH  180
LYPNLVRGSL ELGFSSNSDP EPWRCKRTDG KKWRCSRDVA PDQKYCERHA HKSRPRSRKP  240
VESNPNFINN NTTTTTRMRS PRSNFVKNNN SNQPTPFSTN MVSPTVPSHA QPRSMGWFMN  300
GETPTAPTAG GSNQEWEQMM QFKLGLKSCY TKCNTDVDVS KQQNESSFNL YREYTGESQG  360
LQTQRPSHDQ YGLLLSPKLA HLEGALNSNQ TQQTRHFIDA WSTTTERDSS IGEIGNRGYV  420
SSNQKLPFSS LTLSMSRGNE TNEETDNTQM GLGILGSERE NVGDLKSQWM NPLSCMSSPP  480
GGPLAEALCL GIASSTRATS SNGCISGSTS SGDGVYT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G131600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211032.10.0growth-regulating factor 8 isoform X1
TrEMBLM5WG200.0M5WG20_PRUPE; Uncharacterized protein
STRINGEMJ122310.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24150.15e-49growth-regulating factor 8