PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G175300.1.p
Common NamePRUPE_ppa026684mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 187aa    MW: 21084.2 Da    PI: 9.7196
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G175300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278.1e-091566654
                        HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHH CS
                 HLH  6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksL 54
                        + +Er+RR ++++  ++L +l+P+  sk+++ K  ls      +A  YIk+L
  Prupe.5G175300.1.p 15 KTVERNRRIHMKDLCFKLASLIPPqHSKPSNSKdtLSQQNQFDLASSYIKQL 66
                        679*********************77755555556999999999*****999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.921966IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-91383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-101384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.0E-61566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-41771No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MKKSSGESSS KLDRKTVERN RRIHMKDLCF KLASLIPPQH SKPSNSKDTL SQQNQFDLAS  60
SYIKQLRERI ENLKERKEKA MRSQLGIDAN STIDADNAMM VRSKLPVLEL RDSGSIIEVM  120
LISGLNKNFM LYEVISVLEE EGAEVISASF STIGDKVFHS LHAQVKISRV GVETSTVWQR  180
LQDLIY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G175300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208890.11e-135uncharacterized protein LOC18777808
TrEMBLM5W8R31e-133M5W8R3_PRUPE; Uncharacterized protein
STRINGEMJ100891e-134(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-31bHLH family protein