PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G201400.1.p
Common NamePRUPE_ppa019308mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 540aa    MW: 59849 Da    PI: 8.4898
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G201400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.0012370392123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C+ C+k+F++   L  H  +H
  Prupe.5G201400.1.p 370 FECTTCNKVFRSYQALGGHRASH 392
                         89**********99999998887 PP
2zf-C2H210.90.0015449471123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         + Cp+C k+F++   L  H r+H
  Prupe.5G201400.1.p 449 HACPICLKVFPSGQALGGHKRSH 471
                         67******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.26E-61032No hitNo description
SMARTSM0035511032IPR015880Zinc finger, C2H2-like
PfamPF139123.7E-51033IPR007087Zinc finger, C2H2
PROSITE profilePS501579.5561037IPR007087Zinc finger, C2H2
PROSITE patternPS0002801232IPR007087Zinc finger, C2H2
SuperFamilySSF576673.26E-691118No hitNo description
SMARTSM003550.08996118IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.28496123IPR007087Zinc finger, C2H2
PROSITE patternPS00028098118IPR007087Zinc finger, C2H2
PfamPF139126.2E-698120IPR007087Zinc finger, C2H2
SuperFamilySSF576679.9E-8370392No hitNo description
PROSITE profilePS5015710.263370397IPR007087Zinc finger, C2H2
SMARTSM003550.039370392IPR015880Zinc finger, C2H2-like
PfamPF139129.2E-13370394IPR007087Zinc finger, C2H2
PROSITE patternPS000280372392IPR007087Zinc finger, C2H2
SuperFamilySSF576679.9E-8444471No hitNo description
PROSITE profilePS501578.787449471IPR007087Zinc finger, C2H2
SMARTSM003550.14449471IPR015880Zinc finger, C2H2-like
PfamPF139125.3E-12449472IPR007087Zinc finger, C2H2
PROSITE patternPS000280451471IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MELEDQQFKH LCKFCSKSFP CGRSLGGHMR SHLTNNSAET DEKLIIGKVK LPSANNVNSD  60
FETGPHHQPG YGLRENPKKT WRLADSSEDT SLLPDKFCRE CGKGFQSWKA LFGHMKCHSE  120
KERVVNSINS FDEEEEEDSW TCANQKLVMD SQSDSETTTP NRRRRSRRRR TRYMGTTTSS  180
SNFSIANAAT SSVSEIEQEQ EEVALCLMML KRDAGHWGGL KFVAHDSSDN NSVFSEAPSS  240
GRTNRVNADI KGKVSVCSGI EILKLKKKLN KKTLELGNLD SDFSKHGSRM KKELLSAVGF  300
SKNDKLDKKM ELAQPQLGSN NKCNSSKRKF QESYDFESRS EQSLKTLSTT RGDVLDSEAV  360
CKSSQKRSKF ECTTCNKVFR SYQALGGHRA SHKKIKGCFA SKVESSENTI ETDLSPEPTS  420
DSKLSKSCNN ENPIEHDVKA EISTENKGHA CPICLKVFPS GQALGGHKRS HLIGGSAENK  480
NSQTIVIQKP AAPEVRDFLD LNLPAPVEEE SSSSHAAAFK PWWVGSSHKH EALVGLISN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G201400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210777.10.0zinc finger protein ZAT4
TrEMBLM5WFA80.0M5WFA8_PRUPE; Uncharacterized protein
STRINGEMJ119760.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-52C2H2-like zinc finger protein