PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G220700.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 264aa    MW: 29547.4 Da    PI: 4.4225
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G220700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.86.5e-141660452
                 AP2  4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52
                         GVr++k +gr++AeIrdp     + +r +lg+f taeeAa+ + + +++
  Prupe.5G220700.2.p 16 MGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 60
                        5***998.**********83....35****************99877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.4E-141484IPR001471AP2/ERF domain
PROSITE profilePS5103217.1351478IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-141561IPR016177DNA-binding domain
PRINTSPR003674.5E-61526IPR001471AP2/ERF domain
PfamPF008472.4E-71653IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-171661IPR001471AP2/ERF domain
PRINTSPR003674.5E-63753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MILMPPILQV MMRNMMGVRR RKWGRYAAEI RDPIQRRRKW LGTFATAEEA AAVYQKKKLE  60
FDSIQSLGKT QRDYQNLQLS DKDKGAFESF QLTERTKHEF QGIPLSEESQ DSSGDAAIET  120
FSAEEAERVF CHPSPSSVLE ISGTASLGIG LKQAKEESSV EVFGGEGSVQ PCFEEELSIL  180
KFPVQPMLPL DIKQLDLGCG ENYVFSSLDQ FFDGMSDIVD YPAFNDGNGE VICLPALDSD  240
FGQQDFAWID QKPEHGMPMK FCS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11938RRKWGRYAAEIRDPIQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G220700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695520.0KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020420006.10.0ethylene-responsive transcription factor ERF118 isoform X2
RefseqXP_020420007.10.0ethylene-responsive transcription factor ERF118 isoform X2
TrEMBLA0A251PC500.0A0A251PC50_PRUPE; Uncharacterized protein
STRINGEMJ102031e-144(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.25e-16ERF family protein