PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G230100.1.p
Common NamePRUPE_ppa000733mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 1061aa    MW: 120529 Da    PI: 8.3104
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G230100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.6e-10430474246
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                         ++WT+ Ed+ l+++v++ G ++W  +a  +g++Rt+ qc  r+q 
  Prupe.5G230100.1.p 430 KSWTAKEDKNLLHLVQEKGIDNWFNVAVLLGTNRTPFQCLARYQR 474
                         58*****************************************96 PP
2Myb_DNA-binding43.85.9e-14483526246
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           WT++Ed +l  av+ lG g+W ++a+ +  gRt+ qc +rw k
  Prupe.5G230100.1.p 483 REWTKDEDARLRSAVEALGEGDWQSVASALE-GRTGSQCSNRWKK 526
                         68*****************************.***********98 PP
3Myb_DNA-binding44.73.1e-14536579246
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                         grWT+eEd++l+ a  ++G+++W++ a+ ++ gRt  qc++r+ +
  Prupe.5G230100.1.p 536 GRWTPEEDKRLKVAQMLFGPKNWNKTAQFVP-GRTQAQCRDRYVN 579
                         8******************************.***********77 PP
4Myb_DNA-binding39.71.1e-12588624240
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 
                         g WT+eEd +l +a++++G   W+++a++++ +Rt+++c
  Prupe.5G230100.1.p 588 GEWTEEEDSRLREAIAEYGYC-WSKVAACVP-RRTDNMC 624
                         68*****************99.*********.******9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.703324423IPR017877Myb-like domain
SMARTSM007178.5E-4328425IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-9331347IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-9396436IPR009057Homeodomain-like
SuperFamilySSF466892.18E-16406476IPR009057Homeodomain-like
PROSITE profilePS512949.556424476IPR017930Myb domain
SMARTSM007172.1E-9428478IPR001005SANT/Myb domain
PfamPF002498.7E-9430474IPR001005SANT/Myb domain
CDDcd001675.56E-7431476No hitNo description
Gene3DG3DSA:1.10.10.608.1E-12437483IPR009057Homeodomain-like
SuperFamilySSF466891.22E-18461534IPR009057Homeodomain-like
PROSITE profilePS5129421.563477532IPR017930Myb domain
SMARTSM007171.0E-13481530IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.0E-17484535IPR009057Homeodomain-like
CDDcd001671.32E-10484528No hitNo description
PfamPF139217.1E-14485546No hitNo description
SuperFamilySSF466893.38E-23532625IPR009057Homeodomain-like
PROSITE profilePS5129410.152533581IPR017930Myb domain
SMARTSM007173.3E-12534583IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.8E-19536588IPR009057Homeodomain-like
CDDcd001672.19E-10537581No hitNo description
PROSITE profilePS5129415.57582635IPR017930Myb domain
SMARTSM007171.1E-8586634IPR001005SANT/Myb domain
PfamPF002492.5E-11588624IPR001005SANT/Myb domain
CDDcd001679.39E-9589624No hitNo description
Gene3DG3DSA:1.10.10.601.4E-14589627IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1061 aa     Download sequence    Send to blast
SLLRGTPPPL RLAMSPLTGS EEDQFSGSDR EEEEEDDDED FDEDMEAIRR ACMLTGKNPD  60
DLNPNNNNHG GDDPRHASGS ESESDSDEGD DDIELLRKIR SRFSNISNFC EPLSLKPLSS  120
LPPAVSDDEE DDYQTLLSVQ KRFAAYQNDT CKPVKETCNE IAHESSQGTE DACMAIHPLS  180
DNAEGQPSAS IELQQSDSCR PSTLPAKYST FPKSAQVFMD AIKKNRSSQK FLRSKLVQIE  240
AKIEENRKLK ERVKILKDFQ VSCKKRTGEA LSQKKDPRVQ LILVNRPRKF RDLKAHDKKI  300
SAMFYGPEEN SHVANYRMTL TKFLHSLDRK KWSKAEKKAL EKGIRQQFQE MVLQFSVHES  360
SCSERPYGDS NHIDDILASI KDLEITPEKI REFLPKVNWE QLASMYIVGR SGAECEARWL  420
NWEDPLINHK SWTAKEDKNL LHLVQEKGID NWFNVAVLLG TNRTPFQCLA RYQRSLNASI  480
LKREWTKDED ARLRSAVEAL GEGDWQSVAS ALEGRTGSQC SNRWKKSLHP TRKREGRWTP  540
EEDKRLKVAQ MLFGPKNWNK TAQFVPGRTQ AQCRDRYVNS LEPSLKWGEW TEEEDSRLRE  600
AIAEYGYCWS KVAACVPRRT DNMCWRYGVL IMSNCFIHLF CCLHLFFLTF ILSRRWKVLF  660
PDDVCLLKEE KRIRKVALMC NFVDRETERP ALGPNDFHPP IVTSTKTLTY SRKQKGKLSK  720
VSKKIRSRRQ KNGQSCSKVS EIDSFDKVET CDGHDASNTK NKVRKQRRIR HKGTHCEQDT  780
HKEPREMSCS DQIVGTSDGD DTTLACFLRN KSKKRKLGPV PSINGKKKRK LVASDSAVQE  840
CPANSIEEGS EVHPEMNKVC DGNQIVSFRK DDEFIVHCDD RISERMPTCS VQSSHLNGNT  900
MASDKEPDGL KLVSGWKAGL QEPVRKVVAI DPESDGDTDD VVLASWRKKK LKKRHPQTAK  960
SGPHACPPSG VTTRSEPLPK RVDQSNDRSQ VPFVAVGNEP GAVDIGKQHG VDHCETVREI  1020
VNIGAEGDHE AGDTTLACFL RNKSKNRQRQ SRRGDNQKPR *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C4e-283986226155MYB PROTO-ONCOGENE PROTEIN
1h89_C4e-283986226155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1807815LRNKSKKRK
2813829KRKLGPVPSINGKKKRK
3825830KKKRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G230100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210492.10.0uncharacterized protein LOC18776212
TrEMBLA0A251PCJ70.0A0A251PCJ7_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ116910.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74413344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-179myb domain protein 4r1