PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G060000.1.p
Common NamePRUPE_ppa007316mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 374aa    MW: 41511.5 Da    PI: 8.2964
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G060000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-05132155123
                         EEETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                         ++C+ Cg+ F+ +++L +H+ t H
  Prupe.6G060000.1.p 132 FPCTACGEIFPKPETLDNHQATrH 155
                         89******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.66132160IPR007087Zinc finger, C2H2
PROSITE patternPS000280134155IPR007087Zinc finger, C2H2
SuperFamilySSF563992.97E-15157372No hitNo description
Gene3DG3DSA:3.90.228.102.6E-12169372IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MANISTLFHK FLSLFILLLH LGCFTFTTNN HHPPTKKHKL SSLLSKPTLK PQKALTASWS  60
YLKRIFTSPR TCKITCTNII QSHLSTPPRS SHHSIVSLVQ PDPDSKYPSG SFPESDISAA  120
SHPFFPLRND IFPCTACGEI FPKPETLDNH QATRHAVSEL IDGDSGKNIV RIIFKTGWTD  180
TRKAPEIRRI LKIHNSEKIL SRFEEYREAV KCKAARNGPV RRRDERCIAD GNELLRFHCS  240
TFVCDLGLNG NSGICNREYC SVCGIIKSGF SPKLDGISTL SSSSRAHVAI PEDIEQEFEF  300
MNVKRAMLVC RVVAGRVGCD SEEDLHDVDK EGGGFDSVVG RGGSGAHTRV DEEELLVFNP  360
RAVLPCFVIV YTV*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.7480.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G060000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007205378.10.0uncharacterized protein LOC18774717
TrEMBLM5VYP90.0M5VYP9_PRUPE; Uncharacterized protein
STRINGEMJ065770.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-111C2H2 family protein