PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G088900.1.p
Common NamePRUPE_ppa019793mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 260aa    MW: 29754.7 Da    PI: 9.1125
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G088900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.3e-201978357
                        --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
            Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                        +R+++t+eql +Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  Prupe.6G088900.1.p 19 SRWCPTPEQLMILEEMYRAgIRTPNASQIQHITAQLslygKIEGKNVFYWFQNHKARDRQ 78
                        8*****************99*************************************996 PP
2Wus_type_Homeobox118.92.2e-381779264
   Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                        +++RW+PtpeQ++iLee+y++G+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk
  Prupe.6G088900.1.p 17 SSSRWCPTPEQLMILEEMYRAGIRTPNASQIQHITAQLSLYGKIEGKNVFYWFQNHKARDRQK 79
                        689***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.3011479IPR001356Homeobox domain
SMARTSM003895.9E-71683IPR001356Homeobox domain
SuperFamilySSF466891.88E-111978IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.1E-81978IPR009057Homeodomain-like
PfamPF000464.7E-181978IPR001356Homeobox domain
CDDcd000861.22E-52079No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MPLSGKQSMT TLTPANSSSR WCPTPEQLMI LEEMYRAGIR TPNASQIQHI TAQLSLYGKI  60
EGKNVFYWFQ NHKARDRQKL RRKLCKQLQQ QQLLYNHHHN YHNYHNNPYH HHHHHQQQQQ  120
QQQSLLGYLD HLSPPASSSA LQQLSNCHNY SSAGFLPPPQ VGVEDALMNQ AWKMEIPQRV  180
EMEKSVMSMY GRDWMMMMMM EDVGPPSPCC STSTRATTTR QPLKTLQLFP ITATNLKEES  240
SSPSSSNPLS PPTTPTPNY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G088900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422427.10.0WUSCHEL-related homeobox 3 isoform X2
TrEMBLA0A251NMA30.0A0A251NMA3_PRUPE; Uncharacterized protein
STRINGEMJ099010.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106322940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-41WOX family protein