PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G103600.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 458aa    MW: 51916.2 Da    PI: 4.2294
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G103600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.71e-1881443128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv..ePwdLpk.....kvkaeekewyfFskrdkkyat.gk.rknratk.. 79 
                         +GfrF+Ptdeel++ +L k v +kk      +++i++++i+ +  eP+++ +     +++ +++e+yfFs+ ++ +++ g+ + nr++   
  Prupe.6G103600.1.p   8 VGFRFRPTDEELITLFLYKMVVEKKalmAAYDTIIRKFNIFGTefEPSEIWNgfggeQLHPHDQELYFFSELNTLSSKaGSrKINRKVGlg 98 
                         7*******************99999774334456*****9855339****75466666666999******998877653441557765555 PP

                 NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          g+W+      +v++++g+++g k+ + + +  + + e++ W+++ey+l
  Prupe.6G103600.1.p  99 GGTWSGERC-DAVYDEEGNEIGHKRKFRYEN--EGSEEHSGWFLEEYSL 144
                         999*98766.678888************984..334469********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.8016161IPR003441NAC domain
SuperFamilySSF1019411.31E-188160IPR003441NAC domain
PfamPF023657.8E-148144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MADSDDRVGF RFRPTDEELI TLFLYKMVVE KKALMAAYDT IIRKFNIFGT EFEPSEIWNG  60
FGGEQLHPHD QELYFFSELN TLSSKAGSRK INRKVGLGGG TWSGERCDAV YDEEGNEIGH  120
KRKFRYENEG SEEHSGWFLE EYSLSGEGCA FDFVICRLRK NERLFGNKRK SSSSLSERQY  180
PKKKMLTKPK PSLTTKGKKV KKDEQQMGSQ ENMNLEPQNY RSPSTLVVSD DEKGNNQLTY  240
NNHDDQFINN SNYFPDDNTM MVNEIITLDD INTLDDTKMI FSDMEWPLPE LPQIADQNHV  300
PLPASSVGAD SVDGVIEACE PSNLVNDNQM GSNNSDEHQD QLLNNTDYCP HDTLIFLGDS  360
DEEGYLINSP TIDDYMDELF PDLAGEWPLP QMPQIAATDE SQVPFPTSEV GAESTKGGEM  420
EAYCNPSHFQ HMGNYQPLEE DINCFSNYSF VDELIGH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G103600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020421236.10.0NAC domain-containing protein 89
TrEMBLA0A251NN910.0A0A251NN91_PRUPE; Uncharacterized protein
STRINGEMJ077471e-145(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3980622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.14e-09NAC domain containing protein 86