PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G105100.1.p
Common NamePRUPE_ppa001495mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 815aa    MW: 89240 Da    PI: 7.4863
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G105100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-096286651954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  Prupe.6G105100.1.p 628 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 665
                         664459******************************87 PP
2BELL111.54.7e-36477545472
                BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         e q+kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl sa+pY+s+Al+++SrhFrcL +ai++q+
  Prupe.6G105100.1.p 477 EYQQKKAKLLYMQEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISMALNTVSRHFRCLTNAIKDQL 545
                         789***************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-44376543IPR006563POX domain
PfamPF075262.0E-42381541IPR006563POX domain
PROSITE profilePS5007111.92606669IPR001356Homeobox domain
SMARTSM003894.1E-8609673IPR001356Homeobox domain
CDDcd000862.96E-11609670No hitNo description
SuperFamilySSF466898.98E-17611676IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-27612673IPR009057Homeodomain-like
PfamPF059203.8E-18626665IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    Send to blast
MEMSGFRPEL HVAQQSRRDK LRVHQTSSPP HHLDSEKLPI HPGLNPDIVH VRNVRNANLL  60
YDPTVFSSEM LNFSINTNAL SGQGSGESEN FGNWRSLNPP QSLDWVTNYT SGSVGSGSNN  120
QNHMFGSRES NNNMSPSTPH LLKPSSFHGY QDVQSSLANQ SAEISSHHVS QKHLGTMHFS  180
SPPLNYLNTL QDVVTSASTG AQDQLEMASL VQQRIMENEL VLLPSYVNQS NTLRFDNASS  240
NSWMNRQPVE NRHHWSSGGG GGMGFSTAKN VDEDMRNGMN NDSNQQGLSL SLSSNPPSNN  300
KLPAAQFGSQ DLHASSHDDH AFKDVQSPKT GKSSADYLCS IAKPSIISKA CGKSLQDIVG  360
TSTSACRSTG PLGPFTGYAT ILKSSKFLKP AQQLLDEFCR NSDSKLTKTR EASERMSGDV  420
SASASVSVST DAANAVETEA VTKGNNSGAS SSTFYGSNEI TSDGGAASIS SGSFGPEYQQ  480
KKAKLLYMQE EVCRRYKQYH QQMQMVVSSF ESVAGLSSAT PYISMALNTV SRHFRCLTNA  540
IKDQLKHIRK ALGEEYLSSA ITTGTTGCSS SKGDKNLAKL KFMGLGFQKH NKSGGGAHLG  600
FSEPQQHVWR PQRGLPERSV AILRAWLFEH FLHPYPTDTD KHMLATQTGL SRNQVSNWFI  660
NARVRVWKPM VEEIHMLETR GGSVEASQDP TKKDGNSLTE GTSSRPDTEH QLGINNMMHD  720
RQLECSGDEE QQYQEIKRSR IECQVPSSMD GGLMGFVPYQ RSGLEVGGLG AVSLTLGLRH  780
GVESAQQQQQ QQLQQQEDQL RRQLGSQMIR DFVG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-15615672158Homeobox protein Meis1
4xrs_B2e-15615672158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G105100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206432.10.0BEL1-like homeodomain protein 9
TrEMBLM5W2N40.0M5W2N4_PRUPE; Uncharacterized protein
STRINGEMJ076310.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.11e-90BEL1-like homeodomain 8