PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G112000.1.p
Common NamePRUPE_ppa019837mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 219aa    MW: 25305.6 Da    PI: 9.7445
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G112000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.84.4e-19101493128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyW 83 
                          GfrF+Ptd e++  +L k v +k+      + ++vi+++++  +k+eP+++ + + +   +++++yf s+ ++   +g r +r+t +g+W
  Prupe.6G112000.1.p  10 LGFRFRPTDGEIIGSFLYKMVVEKRpltsmPQYNKVIHKCNLfgNKCEPSEIWRDYGGdqlKDQDLYFVSELQR---NGLRIQRKTGRGTW 97 
                         6*******************9999889886556678****9844699*****7533222236668888888766...799*********** PP

                 NAM  84 katgkdkevlsk........kgel..vglkktLvfykgrapkgektdWvmheyrl 128
                         ++t + ++v+++        +  l  +g k+ + + +g++++  ++ W+++ey+l
  Prupe.6G112000.1.p  98 SETETYQNVKDEvdeingksN--LdvIGRKRKFRYENGNTSE-DHAVWLLDEYSL 149
                         **********98777755443..166*********9988888.89********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.1898175IPR003441NAC domain
SuperFamilySSF1019419.29E-209175IPR003441NAC domain
PfamPF023657.5E-1311149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MANSGVTQLL GFRFRPTDGE IIGSFLYKMV VEKRPLTSMP QYNKVIHKCN LFGNKCEPSE  60
IWRDYGGDQL KDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVKDEV DEINGKSNLD  120
VIGRKRKFRY ENGNTSEDHA VWLLDEYSLF KNASKNGTSS NCYDFDVVIC RLRRKGNMDK  180
SGKKRKCLSQ DQSNKKTKRD QSTKEMKTEN SVGPQIMNA
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G112000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021825151.11e-148NAC domain-containing protein 41-like
TrEMBLA0A251NNN81e-162A0A251NNN8_PRUPE; Uncharacterized protein (Fragment)
TrEMBLM5W3Q11e-161M5W3Q1_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ083771e-162(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1785336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.22e-11NAC domain containing protein 50