PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G144900.1.p
Common NamePRUPE_ppa002583mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 656aa    MW: 72320.5 Da    PI: 7.7259
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G144900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-093714081954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Prupe.6G144900.1.p 371 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 408
                         554459******************************88 PP
2BELL119.21.8e-38235306172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         +rqelq+kkakL+s+l+eV++rY+qy++q+q vi sFe++ag gsak+Yt+lAl++iS++FrcLkdai+ qi
  Prupe.6G144900.1.p 235 QRQELQMKKAKLVSMLDEVEQRYRQYHQQMQFVITSFEQAAGFGSAKSYTHLALQTISKQFRCLKDAISTQI 306
                         69********************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.4E-60165304IPR006563POX domain
PfamPF075263.2E-48170303IPR006563POX domain
PROSITE profilePS5007112.066349412IPR001356Homeobox domain
SMARTSM003897.8E-10352416IPR001356Homeobox domain
CDDcd000863.29E-12352413No hitNo description
SuperFamilySSF466894.71E-17353419IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-28355418IPR009057Homeodomain-like
PfamPF059204.4E-18369408IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    Send to blast
MATFFHHGSS EIQAPTDHAL QTLYLMNPNY VPSFSDSAQQ NPTPPSMLLF NHTPPPTTHH  60
LVGIPLHSAA VGSNNSDDHS PPSLQHQTDP SRLHYNLWGP LGGQTPVGAS AVSPTSATTQ  120
QGLSLSLSTH QQPGYNSNYR PSSFPAERDV PAKGSSLSSV SAMSHGFSGV LLGSKYLKAA  180
QELLDEVVHV GKGSNADELD GGIKDKMKVS RETTAGIGAS SSGGVKQGAE LNTAQRQELQ  240
MKKAKLVSML DEVEQRYRQY HQQMQFVITS FEQAAGFGSA KSYTHLALQT ISKQFRCLKD  300
AISTQIKASS KNLGEEECLG AKIEGSRLKY IDNHVRQQRA LQQLGMVQHN PWRPQRGLPE  360
RAVSVLRAWL FEHFLHPYPK DSDKVMLAKQ TGLTRSQVSN WFINARVRLW KPMVEEMYVE  420
ETKEQEKNGS RNTANYKESG STTPRESAST RIDDQMFRST HENFSNQHPS PNEKSNNSSL  480
SASPMAGSLQ SQSGFNLVGM SNMQGSPKKR KSSEIENSPS SILSMDTDMK ANETNREITT  540
DHANGFGTYP IPEIERFDMN PEHLAQRFHG NGVSLTLGLP HRENISLSGT QQSFLSNHGQ  600
INIHDQLGRR FNTGGEADFC AINHPQPSHS GIDYEDMDMR SRKRFAAQLL PDFVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16358416563Homeobox protein Meis2
3k2a_B3e-16358416563Homeobox protein Meis2
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.198960.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G144900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208166.10.0BEL1-like homeodomain protein 1
RefseqXP_020421595.10.0BEL1-like homeodomain protein 1
TrEMBLM5WRB50.0M5WRB5_PRUPE; Uncharacterized protein
STRINGEMJ093650.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-143BEL1-like homeodomain 1