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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.6G223200.1.p |
| Common Name | PRUPE_ppa005079mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
GRAS |
| Protein Properties |
Length: 479aa MW: 53107.6 Da PI: 5.5807 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.6G223200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 301.8 | 1.7e-92 | 58 | 475 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsP 89
++lL++cA+a++++d++laq++L+ l+++a +dgd++qRl+ f++AL r ++ + +l +a++ s+++ + +++++++ +l f +++P
Prupe.6G223200.1.p 58 EQLLVHCANAIETNDATLAQQILWVLNNIAPQDGDSNQRLTCAFLRALIVRAVNiGSCKLLAAMANSQANFTIHTHKFSVIELasFIDLTP 148
79***************************************************95445677777777777666777777777788****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg...skeeleetgerLakfAeelgv 174
+++f++ +aN aIleaveg + +Hi+D+++++++Q p+L +a+a R+ +pp l++T+ gs e + ++ee+g++L +fA++ ++
Prupe.6G223200.1.p 149 WHRFGFTAANAAILEAVEGYSVIHIVDLSLTHCMQIPTLVDAIAGRQegnVSPPLLKLTVAGSTEDVppmLDLSYEELGSKLVNFARSRNI 239
***********************************************554459**********888798888999**************** PP
GRAS 175 pfefnvl.......vakrledleleeLrvkp.gEalaVnlvlqlhrll...............................desvsleserde 226
+ef+v+ a+ +++l++++L + gEal+Vn++++lh+++ +++ +++s r+
Prupe.6G223200.1.p 240 ILEFRVIpssytdgFANLIQQLRVQNLVYAEsGEALVVNCHMMLHYIPeetltlpsinsnpnlsscgssssygydvassSSTSASSSLRTM 330
*******8885555555555556666655559********************************************9965555556689** PP
GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWre 317
+Lk++++l P+vvv+v+++ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a eg++r+er e + +W +
Prupe.6G223200.1.p 331 FLKALRGLDPTVVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-MCWKIENVIAYEGFQRVERVEPKCRWVQ 420
**************************************************************.9*************************** PP
GRAS 318 rleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
r+++a F++v+++e+a+ ++k++l +++ g+ ++ e++ +vl+Wk++++v+++aW
Prupe.6G223200.1.p 421 RMRNANFQSVSFGEDAVLEVKAMLDEHA-AGWGLKREEEDVVLTWKGHNVVFATAW 475
****************************.8999*********************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MMQFTEAPPP ALHQIITAPF SNLPMMNKNQ THRTRPWPGF PTSAKALGTN FGDANCMEQL 60
LVHCANAIET NDATLAQQIL WVLNNIAPQD GDSNQRLTCA FLRALIVRAV NIGSCKLLAA 120
MANSQANFTI HTHKFSVIEL ASFIDLTPWH RFGFTAANAA ILEAVEGYSV IHIVDLSLTH 180
CMQIPTLVDA IAGRQEGNVS PPLLKLTVAG STEDVPPMLD LSYEELGSKL VNFARSRNII 240
LEFRVIPSSY TDGFANLIQQ LRVQNLVYAE SGEALVVNCH MMLHYIPEET LTLPSINSNP 300
NLSSCGSSSS YGYDVASSSS TSASSSLRTM FLKALRGLDP TVVVLVDEDA DLTSNNLVCR 360
LRSAFNYLWI PYDTVDTFLP RGSKQRQWYE ADMCWKIENV IAYEGFQRVE RVEPKCRWVQ 420
RMRNANFQSV SFGEDAVLEV KAMLDEHAAG WGLKREEEDV VLTWKGHNVV FATAWMPA*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
