PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G260600.1.p
Common NamePRUPE_ppb012667mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 215aa    MW: 24053.6 Da    PI: 4.7946
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G260600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.7e-053456123
                        EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                        y C  C++sFs+   L  H++ H
  Prupe.6G260600.1.p 34 YICAFCKRSFSNAQALGGHMNIH 56
                        89*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.3E-53159IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576679.76E-73161No hitNo description
PROSITE profilePS5015711.243461IPR007087Zinc finger, C2H2
PROSITE patternPS0002803656IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MERYHASNNI EKFDQIKWSS SDDQISGSGQ AKSYICAFCK RSFSNAQALG GHMNIHRRDR  60
ARIRQFSEDQ NQLANISSTD GITKNPSAHH SRANSEDKNS IQMELNETNI PRNPILSHPF  120
TRDEDDDVVI IDAANKGKVS IEEVQVQLQL PLFVEEPSGL ACTVDINKNT VECTSGGCRD  180
EETMKRAEEL DLELRLGPEP IETPSTLSTR EFFI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G260600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206308.11e-160transcriptional regulator TAC1
TrEMBLM5W1921e-158M5W192_PRUPE; Uncharacterized protein
STRINGEMJ075071e-159(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33353162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.18e-16C2H2 family protein