PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G338700.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 374aa    MW: 42962.3 Da    PI: 5.5359
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G338700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57388.48.9e-28111211397
              DUF573   3 fqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqk 87 
                          +r+ws+eDe+ lL+ l+d   ++g+    ++d+  fye vk +++++ ++ q+veK+rrLKkK+++ v+k     ++gke++f+++hd+ 
  Prupe.6G338700.1.p 111 RKRVWSKEDELELLRSLLDDYYSRGQirTTVKDTASFYEEVKPKLKLECNRAQMVEKLRRLKKKYHNVVNKmkdmNSTGKEFRFKNPHDKV 201
                         58*****************9999999877888***********************************99997777789************* PP

              DUF573  88 ifelskkiWg 97 
                         +fels kiW+
  Prupe.6G338700.1.p 202 VFELSDKIWN 211
                         *********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-25112211IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MAWPPLLSWI LSSSSSSSSS EYESDDNNDI EDLGGINDVP DNNPKSQNDN IDDHENDDVS  60
YQPQEEDQNS NSTSDYTFTV SEPSAKRRRI DRTYKPALTS DAPEENKKRR RKRVWSKEDE  120
LELLRSLLDD YYSRGQIRTT VKDTASFYEE VKPKLKLECN RAQMVEKLRR LKKKYHNVVN  180
KMKDMNSTGK EFRFKNPHDK VVFELSDKIW NVVDSHEDYA PNSKYVSICN NVKVKKEEDN  240
VGSSSVADHE RPQMRHTWSH SRLTTTFDEN TKAHDVLNDN GTTSSLNNNN KNKNNNNNVD  300
DNMKNDIPGL IIEGLAMNPL PLSLSKFGSG VEVADEKWRK QQILELETYS KRLDLVQHQV  360
KAALDELRSK GDE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18589KRRRI
2105112NKKRRRKR
3106111KKRRRK
4106112KKRRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G338700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007207963.20.0probable transcription factor At5g28040
TrEMBLA0A251P1700.0A0A251P170_PRUPE; Uncharacterized protein
STRINGEMJ091620.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.15e-31DNA-binding storekeeper protein-related transcriptional regulator