PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G015200.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 123aa    MW: 13766 Da    PI: 4.143
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G015200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.15.7e-0876117143
                FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                         ++Y++Y+ke GF+v+k++s+k  ++ge +  t+ Cs++gk++ 
  Prupe.7G015200.1.p  76 EYYKNYGKEKGFEVSKRTSRKG-DSGELKYLTLACSRSGKSKC 117
                         69***************99998.8999*************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.9E-576117IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MEDITSLEDN SSEPNEIEDT KNLEGNSNEL NEMEDAANLE EYSSAVNEME DPTNMKDKVK  60
DPEVGAIFDS LEELAEYYKN YGKEKGFEVS KRTSRKGDSG ELKYLTLACS RSGKSKCNLL  120
KY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G015200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021818126.15e-67protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A251N4Z48e-81A0A251N4Z4_PRUPE; Uncharacterized protein
STRINGEMJ053396e-40(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13793717
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.15e-07FAR1-related sequence 10