PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G039900.1.p
Common NamePRUPE_ppa024966mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 244aa    MW: 27675.2 Da    PI: 5.4372
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G039900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.7e-1471122155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         ++ +hn+ Er RR++iNs ++  r+llP +   ++kKls  ++  ++ +YI +Lq
  Prupe.7G039900.1.p  71 KKLNHNASERDRRKKINSLYSSMRSLLPAD---QAKKLSIPDTISRVLKYIPELQ 122
                         6789**************************...*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-1461134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.66270121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.2E-1271137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.74E-971126No hitNo description
PfamPF000102.5E-1171122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-776127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MLALSPPVFS TVGWPSEDPI GYDQNYFYRD SSTDQTAESF LHILPSQLPQ FELDLSTTIS  60
GDNSSGSTMA KKLNHNASER DRRKKINSLY SSMRSLLPAD QAKKLSIPDT ISRVLKYIPE  120
LQKQVEGLIR KREELLSRAS NQEDVMREEK DMKSTARSSS LPAVSTYRLS DRELAIQIST  180
LKTHNNLLSE ILLNLEEEGL QVLNASFLES SGERVFYNLH LQVERSYRLE CENLSEKLMS  240
FYA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G039900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243130.11e-169PREDICTED: transcription factor ORG2-like
TrEMBLM5VYD81e-176M5VYD8_PRUPE; Uncharacterized protein
STRINGEMJ061161e-177(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-56bHLH family protein