PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.7G064500.1.p

Common Name

PRUPE_ppb019633mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 130aa MW: 15355.6 Da PI: 10.8046

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.7G064500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.4	1.1e-13	21	109	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke.rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y++Y+ +GF++r+s+ ++s + g +t+r++ Cskeg+ +++ +++e+ r+ r++tr + + v+ + ++++ v+k+++eH H la Prupe.7G064500.1.p 21 YSNYSLAIGFTIRRSRLRRS-KGGVVTNRQWLCSKEGSISKKWTNREDIvRTLRKKTRENHYTAFAVQYCHkRDVYIVNKFVNEHIHRLA 109 9****************9.8889**********999988555415579999999999999989************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.8E-11	21	109	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MPMNDLEGRE FANFEEAKRS YSNYSLAIGF TIRRSRLRRS KGGVVTNRQW LCSKEGSISK 60 KWTNREDIVR TLRKKTRENH YTAFAVQYCH KRDVYIVNKF VNEHIHRLAH SHKVLFLRSH 120 RCVKESDIA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.7G064500.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020424555.1	1e-56	protein FAR1-RELATED SEQUENCE 5
TrEMBL	M5WFQ4	5e-91	M5WFQ4_PRUPE; Uncharacterized protein
STRING	EMJ05610	8e-92	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15759	4	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-09	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Prupe.7G064500.1.p
Entrez Gene	18771633