PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G079300.2.p
Common NamePRUPE_ppa008075mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 347aa    MW: 38259.8 Da    PI: 8.1473
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G079300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-17184237255
                         T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
            Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                         rk+ +++k+q   Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa++
  Prupe.7G079300.2.p 184 RKKLRLSKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARY 237
                         678899**********************************************97 PP
2HD-ZIP_I/II121.93.2e-39184274192
         HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                         +kk+rlsk+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRAR+ t q+E+d+e+Lkr++++l++en+rL+ke +eLr +l
  Prupe.7G079300.2.p 184 RKKLRLSKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARYNTFQTEVDCEYLKRCCETLTDENRRLQKELQELR-AL 273
                         69*************************************************************************************9.55 PP

         HD-ZIP_I/II  92 k 92 
                         k
  Prupe.7G079300.2.p 274 K 274
                         5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046186.4E-946146IPR006712HD-ZIP protein, N-terminal
Gene3DG3DSA:1.10.10.604.4E-17169234IPR009057Homeodomain-like
PROSITE profilePS5007116.503180240IPR001356Homeobox domain
SuperFamilySSF466892.18E-17181249IPR009057Homeodomain-like
SMARTSM003892.4E-13182244IPR001356Homeobox domain
PfamPF000465.7E-15184237IPR001356Homeobox domain
CDDcd000862.52E-15184237No hitNo description
PfamPF021836.5E-10241274IPR003106Leucine zipper, homeobox-associated
SMARTSM003401.3E-24241283IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MELALSLGDA SKPFLFLDKA PKMGSKDLGF CMGLGGAFSA RSDESRESIH EGDHDQDERR  60
RRRVSSDPPV QLNLLPSAPV PRSHASSQLR FPWLTDNLAV SEPAGSSDGP GRGLDVNRMP  120
GMVAAAEEAE DAAAPLSSPN STVSSFQMDF GVGNGGRSSK RDLELETDRA SSRASDDEDN  180
GSTRKKLRLS KDQSAFLEES FKEHSTLNPK QKLALAKQLN LRPRQVEVWF QNRRARYNTF  240
QTEVDCEYLK RCCETLTDEN RRLQKELQEL RALKTSQPFY MQLPATTLTM CPSCERVVTT  300
AAANTTNNNN NNSLKSALTK PRLHHPFAQA QVHMQHQVQA SKGAAA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182188TRKKLRL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G079300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202315.10.0homeobox-leucine zipper protein HOX11
SwissprotP466651e-102HAT14_ARATH; Homeobox-leucine zipper protein HAT14
TrEMBLA0A251N8B20.0A0A251N8B2_PRUPE; Uncharacterized protein
STRINGEMJ035140.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.14e-79homeobox from Arabidopsis thaliana