PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G102000.1.p
Common NamePRUPE_ppa025103mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 286aa    MW: 32123.7 Da    PI: 7.3013
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G102000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.41.5e-4141391127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                         lppGfrF Pt+eelv++yL+kk+eg++      +++vi+ + iy+++P+dLp+    +++++ ++w+fF++r++++a+g r++r t++gyW
  Prupe.7G102000.1.p   4 LPPGFRFYPTEEELVSFYLQKKLEGRRedlnRVMDRVIPVLYIYEYNPSDLPQfsgeACHGDPEQWFFFIPRQESEARGGRPRRLTTTGYW 94 
                         79*************************665433344799999**********656655555777*************************** PP

                 NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                         katg+   v+s+ +++++glk+t+vfy+grap+g+kt+W m+ey+
  Prupe.7G102000.1.p  95 KATGSPSFVYSSnSNRAIGLKRTMVFYNGRAPHGRKTEWKMNEYK 139
                         **********9866778***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-443178IPR003441NAC domain
PROSITE profilePS5100547.6484178IPR003441NAC domain
PfamPF023659.8E-235139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MEDLPPGFRF YPTEEELVSF YLQKKLEGRR EDLNRVMDRV IPVLYIYEYN PSDLPQFSGE  60
ACHGDPEQWF FFIPRQESEA RGGRPRRLTT TGYWKATGSP SFVYSSNSNR AIGLKRTMVF  120
YNGRAPHGRK TEWKMNEYKA IEAHHADQNQ PLIASSSSNT PSAPTLRQEF SLCRVYKKSK  180
CLRAFDRRPL GAEIMSNPSL NLNQTAAAHE GAGHQGQGSA SHSRNPLMGS DQRTNSSSPE  240
SSSSGDHHGP QPPSQPAGET GTLPMFIDNE ALWDLEQLMI NNNWL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-31417817165NO APICAL MERISTEM PROTEIN
1ut4_B1e-31417817165NO APICAL MERISTEM PROTEIN
1ut7_A1e-31417817165NO APICAL MERISTEM PROTEIN
1ut7_B1e-31417817165NO APICAL MERISTEM PROTEIN
4dul_A1e-31417817165NAC domain-containing protein 19
4dul_B1e-31417817165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G102000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007203180.10.0NAC domain-containing protein 90
TrEMBLM5VSR50.0M5VSR5_PRUPE; Uncharacterized protein
STRINGEMJ043790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF87134123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.18e-63NAC domain containing protein 90