PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G115900.1.p
Common NamePRUPE_ppa015643mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 202aa    MW: 22481.2 Da    PI: 4.6906
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G115900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.73.3e-144493255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                         ykGVr+  + g+Wv+e+r p     k+ r++lg+f  +++Aa+a++ a+++l+g
  Prupe.7G115900.1.p 44 IYKGVRQ--RCGKWVCELRQP---DqKKSRIWLGTFTCPDMAARAYDVAALALKG 93
                        69***86..47******9998...3357************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-94393IPR001471AP2/ERF domain
CDDcd000187.98E-2643102No hitNo description
PROSITE profilePS5103219.4444101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-2644103IPR001471AP2/ERF domain
SMARTSM003801.5E-2744107IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-1744103IPR016177DNA-binding domain
PRINTSPR003671.0E-64556IPR001471AP2/ERF domain
PRINTSPR003671.0E-683103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MTDFTDDASS SSSNRVSAQA HLQSVEFKKR KAGRKKFNET RHPIYKGVRQ RCGKWVCELR  60
QPDQKKSRIW LGTFTCPDMA ARAYDVAALA LKGKSAALNF PHEASTLPRI ASTCSVKDLQ  120
CAAAEAAEGF FEVEVKSSGL EEKEEEEVVY LDEEELFNMP GLIDSLAEGL ILTPPAMQKG  180
FNWNDFDDDM ENAVDFSLWS D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-15421031274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Mostly expressed in developing seeds and apices. {ECO:0000269|PubMed:17136305}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:17136305}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G115900.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By calcium ion, methyl-jasmonate (MeJA), cold, drought, and high salinity stress. {ECO:0000269|PubMed:17136305}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204774.11e-149dehydration-responsive element-binding protein 1F
SwissprotA2WZI43e-49DRE1F_ORYSI; Dehydration-responsive element-binding protein 1F
SwissprotQ8S9Z53e-49DRE1F_ORYSJ; Dehydration-responsive element-binding protein 1F
TrEMBLM5W9P61e-148M5W9P6_PRUPE; Uncharacterized protein
STRINGEMJ059731e-149(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.16e-26dehydration response element B1A
Publications ? help Back to Top
  1. Wang Q, et al.
    Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice.
    Plant Mol. Biol., 2008. 67(6): p. 589-602
    [PMID:18470484]
  2. Liu HH,Wang YG,Wang SP,Li HJ
    Cloning and characterization of peanut allene oxide cyclase gene involved in salt-stressed responses.
    Genet. Mol. Res., 2015. 14(1): p. 2331-40
    [PMID:25867379]