PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G118500.2.p
Common NamePRUPE_ppa009356mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 291aa    MW: 31399.1 Da    PI: 4.7843
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G118500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-05263286123
                         EEETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                         + C+ C++sF++   L++H +  H
  Prupe.7G118500.2.p 263 FNCQSCNRSFNSDGALQSHTKAkH 286
                         78*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.96E-5256285No hitNo description
PROSITE profilePS5015712.133263290IPR007087Zinc finger, C2H2
PfamPF128742.6E-4263285No hitNo description
Gene3DG3DSA:3.30.160.609.7E-4263286IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS000280265286IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEFWGVEVKS GQSVSVEPKN KVVHLSQVCL DDVKKAKGSN PISLFVKTGN HKLVLGILSA  60
EKFPQLPLDF FFGEKFELSH NWKNGSVHFT GYKSLSNTGD NSDSEEDVAL TVVDNGKPKV  120
STEDAKKAIK SEQKEASSDD DESDDEEVGA VQTKVKFGEG SSEDEDESGD DDDDDADSED  180
ETDDSEEEDE ETPKKADVSK KRPAESTKSI ANNKKAKFVT PEKTDSKKGS VHIATPHPAK  240
QAGKKPATSD QSKQQAPKSG GTFNCQSCNR SFNSDGALQS HTKAKHSAAK *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.205440.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G118500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202380.10.0histone deacetylase HDT1 isoform X3
TrEMBLM5VQN70.0M5VQN7_PRUPE; Uncharacterized protein
STRINGEMJ035801e-168(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.19e-29histone deacetylase 2C