PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G144100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 332aa    MW: 37559.8 Da    PI: 9.7087
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G144100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.5e-121071674398
                         S.........-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                  B3  43 g.........rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         +          +W v++  +k  ++++l+kGWk+Fv++++Lk  +f+vF + g+ +f  +v ++ 
  Prupe.7G144100.1.p 107 NqlshlwtsaGTWAVNV--KKVNDKFFLQKGWKKFVHDHDLKLCEFLVFDYAGNLGF--YVDIYG 167
                         244444444489*****..999999**************************998888..777765 PP
2B353.16e-17252328181
                         EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                  B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                         ffk+ +++++ ++g ++lp++f+++h    e+  t+tl+ ++g++W vkl +++ +g+  l++G   F+++n+L++gD+++
  Prupe.7G144100.1.p 252 FFKIAIQNSYIRRGYIYLPRNFVKTHLT--EQRATVTLRVLDGKTWPVKLAFEGERGK--LGGGFMTFCRDNKLEVGDVCL 328
                         99***********************953..36679***************99888888..9******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010190.05343169IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.7E-12115171IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.94E-13115171IPR015300DNA-binding pseudobarrel domain
PfamPF023621.6E-8117166IPR003340B3 DNA binding domain
PROSITE profilePS5086310.828118169IPR003340B3 DNA binding domain
CDDcd100172.26E-8118166No hitNo description
Gene3DG3DSA:2.40.330.104.7E-19245329IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.94E-20246329IPR015300DNA-binding pseudobarrel domain
CDDcd100171.92E-16252327No hitNo description
SMARTSM010191.8E-4252331IPR003340B3 DNA binding domain
PfamPF023628.8E-15252328IPR003340B3 DNA binding domain
PROSITE profilePS5086313.155252331IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MHPLAATTGK ALALRRDIGS ESENPSFEVA MWFSYIRFAG FSLSTIISLS SLVRVSDGRT  60
WPVNKALLSP EEEEDRVQTG NRKQEKENGD GKKKPLLLQV LVGDSSNQLS HLWTSAGTWA  120
VNVKKVNDKF FLQKGWKKFV HDHDLKLCEF LVFDYAGNLG FYVDIYGRDG CKKKFVTAIR  180
EKGRRPHEEG HGNVIHRRSP RHHGKQNLPS IDPIKYEAID TESETSMHPL ATSTGETIPL  240
QRNNSFNSEK PFFKIAIQNS YIRRGYIYLP RNFVKTHLTE QRATVTLRVL DGKTWPVKLA  300
FEGERGKLGG GFMTFCRDNK LEVGDVCLCL D*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G144100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020424595.10.0B3 domain-containing protein At3g17010
TrEMBLA0A251NBE40.0A0A251NBE4_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16060710
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17010.13e-16B3 family protein