PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G144100.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 321aa    MW: 36292.3 Da    PI: 9.9545
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G144100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.4e-111151674298
                         TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                  B3  42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         s  +W v++  +k  ++++l+kGWk+Fv++++Lk  +f+vF + g+ +f  +v ++ 
  Prupe.7G144100.2.p 115 SAGTWAVNV--KKVNDKFFLQKGWKKFVHDHDLKLCEFLVFDYAGNLGF--YVDIYG 167
                         3389*****..999999**************************998888..777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.3E-12115171IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-13115171IPR015300DNA-binding pseudobarrel domain
PfamPF023621.6E-8117166IPR003340B3 DNA binding domain
PROSITE profilePS5086310.828118169IPR003340B3 DNA binding domain
CDDcd100171.46E-8118166No hitNo description
Gene3DG3DSA:2.40.330.106.6E-9245301IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.41E-9246301IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.655252320IPR003340B3 DNA binding domain
CDDcd100175.43E-8252302No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MHPLAATTGK ALALRRDIGS ESENPSFEVA MWFSYIRFAG FSLSTIISLS SLVRVSDGRT  60
WPVNKALLSP EEEEDRVQTG NRKQEKENGD GKKKPLLLQV LVGDSSNQLS HLWTSAGTWA  120
VNVKKVNDKF FLQKGWKKFV HDHDLKLCEF LVFDYAGNLG FYVDIYGRDG CKKKFVTAIR  180
EKGRRPHEEG HGNVIHRRSP RHHGKQNLPS IDPIKYEAID TESETSMHPL ATSTGETIPL  240
QRNNSFNSEK PFFKIAIQNS YIRRGYIYLP RNFVKTHLTE QRATVTLRVL DGKTWPVKLA  300
FEAVFYCKTE ASSCTSSPGK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G144100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020424595.10.0B3 domain-containing protein At3g17010
TrEMBLA0A251NDI00.0A0A251NDI0_PRUPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17010.18e-12B3 family protein