PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G146900.1.p
Common NamePRUPE_ppa001286mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 863aa    MW: 92758.2 Da    PI: 7.1881
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G146900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.23.1e-096026391954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  Prupe.7G146900.1.p 602 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 639
                         664459******************************88 PP
2BELL121.43.8e-39462533172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         +r e+q++k+kLls+l+eVd+rY++y+eq+q+v+++F+ v+g g+a pYt+lA+ka+SrhFrcLkdai+ q+
  Prupe.7G146900.1.p 462 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNAFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQL 533
                         589******************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.1E-85387531IPR006563POX domain
PfamPF075269.5E-52392530IPR006563POX domain
PROSITE profilePS5007112.568580643IPR001356Homeobox domain
SMARTSM003891.2E-9583647IPR001356Homeobox domain
CDDcd000863.73E-13583644No hitNo description
SuperFamilySSF466893.72E-17585650IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28586649IPR009057Homeodomain-like
PfamPF059204.5E-18600639IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 863 aa     Download sequence    Send to blast
MGIATVPPLL PTPPSIFSSS SSKGHHHHSI IDSESYSNSP NSMSQDYHHQ GIFTFSNGFE  60
RSAMTTHQEQ QQQQQHHLAQ QIRREKLRVQ GFETPPPPPL VGLDEEESGG LPVYETAGML  120
SEMFNYPPGG GPAGAAELLE HPMAQAYRMA RQQQEPVSGA AEWYGSRVVG GLGALGDSKN  180
HNSRDSIQHH HQQQHQISTI NADSAAAMQL FLMNPSQPRS PSPPAHTTSS TLHMLLPNPS  240
STTNSLQGFA TPSGGGGAFG QFTWVPESHH GHDGGNPTGG AGEIGGVVEG QGLSLSLSTS  300
LQHLEAAKAE EFRMGSDSGG GLLYYNNQGD HQGSTNQYKN LGAHHHHHQH HQSQQQQQQQ  360
ALHSLQQGGV VGGHVGFGSS SGSASSFGVV NVLRNSKYVK AAQELLEEFC SVGRGQLKKN  420
KFGGTGGRHN STNPSSNPAG SGGGGGASSS SSKDVPPLSA ADRIEHQRRK VKLLSMLDEV  480
DRRYNHYCEQ MQMVVNAFDL VMGFGAAVPY TALAQKAMSR HFRCLKDAIT AQLKHSCELL  540
GEKDGAGTSG ITKGETPRLK MLEQSLRQQR AFHQMGMMEQ EAWRPQRGLP ERSVNILRAW  600
LFEHFLHPYP SDADKHLLAR QTGLSRNQVS NWFINARVRL WKPMVEEMYQ QETNEEVGGA  660
AAAAADHHHQ DQRERNNQNQ NSSGLNAQTP TPTTTAATTT TTTTPTTTPT TTNSPTGKRS  720
EINASENDPS LITINRQQQQ LQHHLQQPMM ATTTASAVAL TASQCFATTS TTANDRLASE  780
DTCRRGSMVA ADYGTTSGNA HIAAHDHQSS SNIGSSTTLI SFGTTTAAGD VSLTLGLRHA  840
GGGNNMPEKN PSSFSIRDFG GC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16589646158Homeobox protein Meis1
4xrs_B1e-16589646158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G146900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0537690.0AF053769.1 Malus x domestica homeodomain protein (Mdh1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204284.10.0BEL1-like homeodomain protein 2
TrEMBLM5W8A60.0M5W8A6_PRUPE; Uncharacterized protein
STRINGEMJ054830.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35243257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-143BEL1-like homeodomain 2