PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G225800.1.p
Common NamePRUPE_ppa007164mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 380aa    MW: 41065.8 Da    PI: 6.7311
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G225800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000512422801255
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Prupe.7G225800.1.p 242 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 280
                         6677889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.357230279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-10240290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.67E-6240284No hitNo description
Gene3DG3DSA:4.10.280.103.4E-7244286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MNRGVNLQSS PVQQMMAGNP NWWSINSMRP PTQPSVTSPF LPPPPPPPSF FIPQFVPNTS  60
SSPSTTSSGL PFPSWHIDDN IQELPESWSQ LLLGGLVGED EKGALMRQFH QAKNKLENWD  120
EQILSSTQAP NAPAADVKQE SSGCGSFVYG HQQGVNDHQH HQDFQSAALS QIMQSTASAS  180
SSPKSSCVTS FNTSMLDFSS KSDVRHPPPH RSSDQCNSTA NGGGALKRAR VQPSSTPTFK  240
VRKEKLGDRI TALHQLVSPF GKTDTASVLL EAIGYIRFLQ SQIEALSLPY LGSGSGNMRQ  300
QPQSAVHGER NCMFPEDPGQ LLNDHCMKRK GAPEQDADEE AKKDLRSRGL CLVPVSCTLQ  360
VGSDNGADYW APALGGGFQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G225800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204357.10.0transcription factor bHLH68
SwissprotQ8S3D13e-96BH068_ARATH; Transcription factor bHLH68
TrEMBLM5VWU80.0M5VWU8_PRUPE; Uncharacterized protein
STRINGEMJ055560.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-85bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]