PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G233800.2.p
Common NamePRUPE_ppa003211mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 557aa    MW: 58944 Da    PI: 6.2527
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G233800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR51.22.6e-16167206140
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                         k++kgC+Ckks ClkkYCeCf+a+  Cse+CkC dCkN e
  Prupe.7G233800.2.p 167 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 206
                         589***********************************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163430.45287207IPR005172CRC domain
SMARTSM011140.08298122IPR033467Tesmin/TSO1-like CXC domain
SMARTSM011143.5E-20167208IPR033467Tesmin/TSO1-like CXC domain
PfamPF036385.7E-13170205IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    Send to blast
MGEADGDESA PTKGQSDAAT AATTSSSSSM SDVPAKKLAR QLDFTGFGGT PASVAVPELP  60
KPQLPTVSVQ QSQPKPPVVA VPVPVPPQPP IPSVRPVYCE CFASGIYCDG CNCVNCCNNV  120
ENEGARRDAV EATLERNPNA FRPKIASSPH GPRDTREEAG EVLILGKHNK GCHCKKSGCL  180
KKYCECFQAN ILCSENCKCI DCKNFEGSEE RQALFHGDHG NNMAYLQQAA NAAITGAIGS  240
SGYASSPPIS KKRKGQELFG PTAKDPSIHR IGQFQQGNHI RPPAPSSPAS VPVNRLGGTA  300
GLGPSKFTYR SLLADIIQPQ DLKELCSVLV VVAEEAAKTL AEQRNTAEKP TETSLTSTTQ  360
DRLQSQKESE AQKAVADDCS SANEADKISP DDSNSDGADV PKGRPMSPAT LALMCDEQDT  420
MFMSAASPNG LMGDRCNTSS QLPNGQGMTE VYAEQERIVL TKFRDCLNRL ITFGEIKETK  480
CSSLARSEAE TQKEQPSNGS TNARMETGNQ QGPVSNGVAK PAVPLTAKTT TPHMVAALAV  540
SKTPSHPENG ESRPKD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A1e-269721624132Protein lin-54 homolog
5fd3_B1e-269721624132Protein lin-54 homolog
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous but expressed mostly in flowers. {ECO:0000269|PubMed:18057042}.
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00045PBMTransfer from AT4G29000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G233800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204824.10.0protein tesmin/TSO1-like CXC 6
SwissprotQ9SZD10.0TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A251NIL70.0A0A251NIL7_PRUPE; Uncharacterized protein
STRINGEMJ060230.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-165Tesmin/TSO1-like CXC domain-containing protein