PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G028500.1.p
Common NamePRUPE_ppa1027145mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 446aa    MW: 51474.3 Da    PI: 6.5806
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G028500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.41.6e-27120216185
            trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 
                         +Wt+q+v++Li+a+++++e+ ++++           +kk++W++vsk+m+ergf++sp+qC++k+++lnkrykk++++ +++ +++++++ 
  Prupe.8G028500.1.p 120 KWTDQMVKLLITAVSYIGEDTSSDCgsggrrkystlQKKGKWKSVSKVMAERGFHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENQ 210
                         7*********************99888899999999**********************************************669999998 PP

            trihelix  80 pyfdql 85 
                         +++d +
  Prupe.8G028500.1.p 211 ALLDVI 216
                         887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.6E-24118243No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MEGHLSQGGM VPGGASYGGL DLEGSMRVQH QTQHPHTIHQ HHPHPRQGSL AHPSIHEGFP  60
LKMGTMHNCD QTISMMDYNK GERSKNSASD EDEPSYTEEG TDGHAEGNRG KKGSPWQRVK  120
WTDQMVKLLI TAVSYIGEDT SSDCGSGGRR KYSTLQKKGK WKSVSKVMAE RGFHVSPQQC  180
EDKFNDLNKR YKKLNDMLGR GTSCQVVENQ ALLDVIDYLT EKEKDDVRKI LSSKHLFYEE  240
MCSYHNGNRL HLPHDPALQK SLQRALRRDE HDNDDPRRHH HDDLDEDDQD METDEHEDFE  300
ENNASHVDNR GIYVLEDSVK RLRQGQGREE FNYGSSLNPQ DCNKSSYCHP PIPPADMNQV  360
LPDGTKAAWL QKQWIESRSL QLEEQKLQIQ VEMLELEKQR FKWQRFSKKR DRELEKLRME  420
NERMKLENER MALELKRKEM GAGFS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G028500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200864.10.0uncharacterized protein LOC18767768
TrEMBLM5VYL50.0M5VYL5_PRUPE; Uncharacterized protein
STRINGEMJ020630.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50013157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-169sequence-specific DNA binding transcription factors