PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.8G037300.1.p

Common Name

PRUPE_ppb021921mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 103aa MW: 12035.6 Da PI: 5.2521

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.8G037300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35	4.6e-11	51	97	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fY++YA++ F +rk++sk+ + ++ei++++fvC ++g e+ k+ Prupe.8G037300.1.p 51 EFYKTYARNSEFGIRKHSSKRIRFTNEIIRKEFVCCRQGCYEPPKDP 97 6**************************************99987766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-8	51	97	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MDVNTEVENQ VDGIEEDNNK MNDEVGVILI VSMNLEPQVG KEFNSLDDVY EFYKTYARNS 60 EFGIRKHSSK RIRFTNEIIR KEFVCCRQGC YEPPKDPKHK RM*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.8G037300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	M5VLT9	2e-69	M5VLT9_PRUPE; Uncharacterized protein
STRING	EMJ02119	3e-70	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	2e-09	far-red elongated hypocotyls 3

Link Out ? help Back to Top
Phytozome	Prupe.8G037300.1.p
Entrez Gene	18766343