PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G071200.3.p
Common NamePRUPE_ppa009401mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 267aa    MW: 28527.6 Da    PI: 5.4363
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G071200.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.17.8e-16174210135
                GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                         C +Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  Prupe.8G071200.3.p 174 CMHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 210
                         99***99889************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132010.8996499IPR010399Tify domain
PfamPF062001.1E-76789IPR010399Tify domain
PfamPF062032.6E-16103145IPR010402CCT domain
PROSITE profilePS5101713.245103145IPR010402CCT domain
SMARTSM004013.8E-10168223IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.71E-10171217No hitNo description
Gene3DG3DSA:3.30.50.101.4E-13172210IPR013088Zinc finger, NHR/GATA-type
CDDcd002024.82E-12173210No hitNo description
PROSITE patternPS003440174201IPR000679Zinc finger, GATA-type
PfamPF003201.6E-13174210IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MSESNHQNSM YGSGGAPQSN QVEEQEDDVE ESIDNPHIRF EDSSAIPPNP LYLTSSEYPP  60
AAATNGGSDQ LTLSFQGEVY VFDEVSPDKG MNDLPVKPIQ PQRAASLSRF REKRKERCFD  120
KKIRYTVRKE VALRMQRKKG QFTSSKASSD DGGPASSGAT QGSGQDESMQ ETSCMHCGIS  180
SKSTPMMRRG PAGPRTLCNA CGLKWANKGV LTGGPKVSNI GMQDPSAKGI EQGDGEAKDS  240
VAITMGANIA PSPNGDNSTM TVDRNL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.137021e-179fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G071200.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008237245.10.0PREDICTED: GATA transcription factor 25-like isoform X2
TrEMBLM5VLF80.0M5VLF8_PRUPE; Uncharacterized protein
STRINGEMJ017170.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.22e-54GATA-type zinc finger protein with TIFY domain