PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G095700.5.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 337aa    MW: 37322.2 Da    PI: 9.182
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G095700.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10250297455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Prupe.8G095700.5.p 250 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 297
                         8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.24E-9244301No hitNo description
SuperFamilySSF474591.24E-15244304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-16246303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.618246296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7250297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-9252302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MNRALPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHL HEHNDPIQLH QQQQGYNFSG  60
NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAGFE  120
EMINGRNNNS NISRTFSCPP TVAAEKKSND AVLSQKISLP TGKESFKKRK ADKVQSNKAV  180
AAEDDSTEKR MKGCAEEGDS KITEQTSTKN NTNNDRESSG DTSKDNSKAS EVQKPDYIHV  240
RARRGQATDS HSLAERVRRE KISERMKYLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV  300
ELLLIRGLTS TLTICLRKRC FLRARPIFRR LGCHQK*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Highly expressed in hypocotyls and cotyledons. Expressed in leaves, stems, and flowers. {ECO:0000269|PubMed:12679534, ECO:0000269|PubMed:23221598}.
Functional Description ? help Back to Top
Source Description
UniProtAtypical bHLH transcription factor that acts as positive regulator of cell elongation downstream of multiple external and endogenous signals by direct binding to the promoters and activation of the two expansin genes EXPA1 and EXPA8, encoding cell wall loosening enzymes. Transcriptional activity is inhibited when binding to the bHLH transcription factor IBH1. {ECO:0000269|PubMed:23221598}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G095700.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007199864.10.0transcription factor bHLH63 isoform X1
SwissprotQ9ZPW38e-45HBI1_ARATH; Transcription factor HBI1
TrEMBLA0A251MVM60.0A0A251MVM6_PRUPE; Uncharacterized protein
STRINGEMJ010630.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.22e-46bHLH family protein