PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G095700.6.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 332aa    MW: 36765.6 Da    PI: 9.032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G095700.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10245292455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Prupe.8G095700.6.p 245 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 292
                         8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.22E-15239299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.96E-9239296No hitNo description
PROSITE profilePS5088815.618241291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-16241298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7245292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-9247297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MNRALPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHL HEHNDPIQLH QQQQGYNFSG  60
NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAGFE  120
EMINGRNNNS NISRTFSCPP TVAAEKKSND AVLSQKISLP TGKESFKKRK ADKAVAAEDD  180
STEKRMKGCA EEGDSKITEQ TSTKNNTNND RESSGDTSKD NSKASEVQKP DYIHVRARRG  240
QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS LQRQVELLLI  300
RGLTSTLTIC LRKRCFLRAR PIFRRLGCHQ K*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Highly expressed in hypocotyls and cotyledons. Expressed in leaves, stems, and flowers. {ECO:0000269|PubMed:12679534, ECO:0000269|PubMed:23221598}.
Functional Description ? help Back to Top
Source Description
UniProtAtypical bHLH transcription factor that acts as positive regulator of cell elongation downstream of multiple external and endogenous signals by direct binding to the promoters and activation of the two expansin genes EXPA1 and EXPA8, encoding cell wall loosening enzymes. Transcriptional activity is inhibited when binding to the bHLH transcription factor IBH1. {ECO:0000269|PubMed:23221598}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G095700.6.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425564.10.0transcription factor bHLH63 isoform X2
SwissprotQ9ZPW37e-46HBI1_ARATH; Transcription factor HBI1
TrEMBLA0A251MXV20.0A0A251MXV2_PRUPE; Uncharacterized protein
STRINGEMJ010630.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.12e-47bHLH family protein