PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G178400.1.p
Common NamePRUPE_ppa018195mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 756aa    MW: 83609.1 Da    PI: 6.7242
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G178400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK888e-28466516252
              RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                         ek+isl +l++yF++++kdA+k++gvc+T+LKriCRq+GI RWP+Rkik++
  Prupe.8G178400.1.p 466 EKRISLPVLRQYFAGSLKDASKSIGVCPTTLKRICRQHGITRWPSRKIKKV 516
                         799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.223455536IPR003035RWP-RK domain
PfamPF020423.3E-23469516IPR003035RWP-RK domain
SuperFamilySSF542772.51E-9681742No hitNo description
Gene3DG3DSA:3.10.20.2405.2E-7701736No hitNo description
PfamPF005643.6E-6701739IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    Send to blast
MLAIGYLKEC TKGRDVLIQI WVPIKRGGRQ YLTTHDQPFS LDPNSKSLAG YRNVSKDYQF  60
ITEEDSAESV GLPSRAFLGK LLEWTPDVRF FRSYEYPRID YAQQYDVRDS LALPIFENGS  120
GTCLGVVEIV MAPQKVNDRP ELEYVCQALE THDELYQAAL TEIVEVLASV CKTHRLPLAQ  180
TWAPCIQQGK GGCRHSDENY ARCVSIVDAA CFVADLDILG FHEACSEHHL FQGQGIVGTA  240
FTINKPCFAT DIKAFSKTEY PLSHHARMFG LHAAVAIPFR SVYTGPADLV LEFFLPKDCQ  300
DPEEQKQMLN SLCIVIQQAC QSLHMNVDKE LKEEIMFPIR EPVIGSDGGL HTEETQRLIS  360
SPPEEPSGKE SSWIAHMIEA QQKGKGVSVS LDYQTEEPKE EFKVTTHWGN TQGSLHSGQV  420
FSEFGQLHQS SGSHGNVEGG ADSYSFGGHR TSGGRKAGEK RRTKTEKRIS LPVLRQYFAG  480
SLKDASKSIG VCPTTLKRIC RQHGITRWPS RKIKKVGHSL KKLQLVIDSV QGAEGAIHIG  540
SFYSSFPELN FPKFPGSGQY SSMNMSDHSK QVNPQQHDQS GLYSHVTTTK SPSSSCSQTS  600
GPNVCVAGAQ QHTITINTLG SGDSLMTEDP VGVLKRACGD ADLHASFQEE TKLIHRSQSH  660
KSFSDNLSYE NLSPLPGSSG QSLRDGGVYR VKATFRDEKK KHLDDDCEWV LLNCDADLEE  720
CMEIYSSSPG RTVRLCLQQV FHPNLAASFG NSRPS*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G178400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409166.10.0LOW QUALITY PROTEIN: protein NLP2
SwissprotQ7X9B90.0NLP2_ARATH; Protein NLP2
TrEMBLA0A251MZJ00.0A0A251MZJ0_PRUPE; Uncharacterized protein
STRINGEMJ002390.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12373399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.10.0Nin-like family protein