PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G265900.1.p
Common NamePRUPE_ppa010217mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 259aa    MW: 29292.5 Da    PI: 5.2486
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G265900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-3054112259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+++Hnh+
  Prupe.8G265900.1.p  54 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTSSHNHP 112
                         69************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-3145114IPR003657WRKY domain
SuperFamilySSF1182906.15E-2650114IPR003657WRKY domain
SMARTSM007741.7E-3553113IPR003657WRKY domain
PROSITE profilePS5081131.29554114IPR003657WRKY domain
PfamPF031069.7E-2655112IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MDETLSPEPD SEVPKELRPE GQASKRRKVV HEKTVVTVKI GTNVGKLKNE GPPSDSWSWR  60
KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERSKTDASV LIITYTSSHN HPGPDVSTTN  120
LTQLQPSTED HNLPALLPKQ EEQEKEQEEK QGKLEDHPAM KTDHEDHFHY IQSPIRSSQN  180
IMIDQEEDPF LEKTHVSSTL GFLLDEEPLS YSQLMSFSTP KSEENDFFDE LEELPTFSSF  240
PSFMRSNLSL ERIPSVPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21541141779Disease resistance protein RRS1
5w3x_D1e-21541141779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G265900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ1803061e-100DQ180306.1 Fragaria x ananassa clone PBCESTFXA1 SSR marker.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201365.10.0probable WRKY transcription factor 69 isoform X1
TrEMBLM5VMY20.0M5VMY2_PRUPE; Uncharacterized protein
STRINGEMJ025640.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.15e-34WRKY DNA-binding protein 65