PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Psi000584

Organism

Picea sitchensis

Taxonomic ID

3332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

BES1

Protein Properties

Length: 191aa MW: 21155.5 Da PI: 9.9948

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Psi#S37602367	PU_unref	Unigene	View CDS
PUT-183a-Picea_sitchensis-11588	PU_unref	plantGDB	View CDS
PUT-183a-Picea_sitchensis-11589	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	138.1	8.6e-43	61	165	6	109
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.sslkssala 104 ++++kE+E++k+RER+RRai+++i++GLR++Gny lp+raD+n+V++AL+reAGw+v++DGttyr + + + ++a s++ s+ + sl+s+ ++ Psi000584 61 REREKEKERTKLRERQRRAITSRILSGLRQYGNYTLPVRADINDVIAALAREAGWTVDPDGTTYRSHAHTPYPVKVAALSSTSLAGSPGSsASLRSTLVK 160 6899*************************************************************99888856666666666555555554668888888 PP DUF822 105 spves 109 p+++ Psi000584 161 NPIDH 165 88776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.2E-41	61	165	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MADQAHTVMS ASAIKRDEDD QELQNQQREQ EQEQEQEEQG QGNAQQVLLP AGNATVKRRI 60 REREKEKERT KLRERQRRAI TSRILSGLRQ YGNYTLPVRA DINDVIAALA REAGWTVDPD 120 GTTYRSHAHT PYPVKVAALS STSLAGSPGS SASLRSTLVK NPIDHRPSGV RLRDGFTLKS 180 PGSTMLGEKG P

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010054915.1	6e-34	PREDICTED: beta-amylase 8
Swissprot	O80831	1e-26	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A059CJR3	1e-32	A0A059CJR3_EUCGR; Beta-amylase
STRING	XP_010054915.1	2e-33	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	4e-21	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]